Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02623 ATGATGAAATCAAATAGTATAGATAATGCTCCCACTCAGTTCCTTCTCAGTGTTGTGAATGGAATTCTTGAAGAAAGTGTTGAAAGAAAAAATGGGGAAATACCTCATCGTGTGGCTTGCTTGTTGAAAAAGGTTACTCAAGAGATTGAGCGGCGCATGTCAACTCAAGCAGAACATTTACGAACTCAAAACAATCTTTTTAAGGCTCGGGAAGAAAAATACAAATCAAGAATAAGAGTACTCGAGGCACTTGCCTATGGAACTATAATGGCTGAGAATATCAGAGAGGAAGAAAAGAAGGCAGATGAAAAAGAAATCATTAGGTTGATGAAAGAGCAGGAGGACAAAAACTTGGAAATTTCATCACTGAAGCAAGAACTGGAAACAACCAAAGTACAATGCTCACAGTTGGAAGGAGAAGCCAAGGGTGCTAAAGCAGAATTGGAACAAAAGTCTCAAGAATATATGCATCAGTTGGAAGAATTAAGAAACAAGGTTAAAAAGCTTGAGGATTCTTCTGATTCAAAAGATCAGAAGTGGAACATGAAATTGAAACAATTGCAGACTGTTATAACATTTCAATTCAGTTCCCTACAGAAATTGAAATTATCTTGGGAATCCATTAAGCAAAATGTTATGAAAGAGCAAACCGTTTATGCAGAGGATTGTGATCGATTAGGTGTTTATCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGCTGCTCTTGCTGAAAATCAAAAAATGTTTAACGAGATTCAAGAATTAAAAGGTGGAAATATCAGAGTATATTGTCGAATTAGACCATTTCTTTCAGGCAAAAAGGAAAAACAGTCTATTGTTGAACACATTGGTGAAAATGATTTGGTTGTGGTAAATCCATCCAAAGAAGGAAAAGATGCCCATCGATCATTTAAATTTAATAAGGTTTTCGGCCATGCCACAACTCAAGCGGAGGTATACTCTGACATCCAATCCTTTATAACATCAGTACTGGATGGGCATAATGTGTGTATATTTGCTTATGGCCAAACTGGCGCAGGGAAAACTTATACAATGACTGGTCCAAGTGGGGCAGAAAGTGAGACTGTTGGTGTCAATTATCGAGCTCTAAATGACCTCTTCAGGATTTCCTCAAGTAGAGAAGGCTTCATTGACTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTCCGTGACTTGTTAATGACAGATGTTGGGATATTGACTCAATCTCAACCAAATGGCTTAGCAGTACCCGGTGCTAGGTTGTTCCCTGTGAAAACGTCTTCAGATGTGATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCGATTCATGTTTGTGGGAAGGACTTGAAGACTGGTTCTACCATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTCTGGAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGCCCTCACGTACCATACAGAAACAGCAAGCTTACTCAACTTTTACAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTTTCCAAATTAATTCAGACATAAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGGGTTTCTAGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGATGTCAGAGAATTAAAGGAACAGATTTCTTCTTTGAAGAACACAATTTTGGCAAAAGATGAGGAGATTAAGAGGCTTCAATTACTCAAAGGTTCAGTTGGTAGCATTGTTAAGCCAAACCAAATTCCACGAAGTAGAAGTATTAGGCACTTTGAAGCTGAAAAACGGAAACCAATGGATGATCATATACACCAAAATGAATTTCTTCATCAATCTGATGGAAGATCAAGTGATTTCTCTGACAGTGGTGTTGCTCCAGGCACAGAAACTGATGGTTCTGAAAATTCCAGTCTCACTGATGGCACAAAATCATCAGATAAGAGATCTAAAACACTGCCCAAAACTGTTCAAGTGATGAGCAAATTAAGCCGAACCTCATCTATCACGCCCACCCCAGTAAAGGACCCTTTGAAGAAGTGA 2205 0.3868 MMKSNSIDNAPTQFLLSVVNGILEESVERKNGEIPHRVACLLKKVTQEIERRMSTQAEHLRTQNNLFKAREEKYKSRIRVLEALAYGTIMAENIREEEKKADEKEIIRLMKEQEDKNLEISSLKQELETTKVQCSQLEGEAKGAKAELEQKSQEYMHQLEELRNKVKKLEDSSDSKDQKWNMKLKQLQTVITFQFSSLQKLKLSWESIKQNVMKEQTVYAEDCDRLGVYLKPLLHAAENYHAALAENQKMFNEIQELKGGNIRVYCRIRPFLSGKKEKQSIVEHIGENDLVVVNPSKEGKDAHRSFKFNKVFGHATTQAEVYSDIQSFITSVLDGHNVCIFAYGQTGAGKTYTMTGPSGAESETVGVNYRALNDLFRISSSREGFIDYEIGVQMVEIYNEQVRDLLMTDVGILTQSQPNGLAVPGARLFPVKTSSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVCGKDLKTGSTMVGNLHLVDLAGSERVDRSGVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFFQINSDISSYSETLSTLKFAERVSRVELGAARSSKESKDVRELKEQISSLKNTILAKDEEIKRLQLLKGSVGSIVKPNQIPRSRSIRHFEAEKRKPMDDHIHQNEFLHQSDGRSSDFSDSGVAPGTETDGSENSSLTDGTKSSDKRSKTLPKTVQVMSKLSRTSSITPTPVKDPLKK 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02623 734 PRINTS Kinesin heavy chain signature 335 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 PRINTS Kinesin heavy chain signature 484 502 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 PRINTS Kinesin heavy chain signature 533 554 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 PRINTS Kinesin heavy chain signature 453 470 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 SMART kinesin_4 259 591 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 ProSiteProfiles Kinesin motor domain profile. 261 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 MobiDBLite consensus disorder prediction 663 734 - -
Pumo10g02623 734 Pfam Kinesin motor domain 267 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g02623 734 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 202 585 - -
Pumo10g02623 734 Coils Coil 106 179 - -
Pumo10g02623 734 MobiDBLite consensus disorder prediction 706 727 - -
Pumo10g02623 734 Gene3D Kinesin motor domain 257 624 IPR036961 -
Pumo10g02623 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 621 IPR027417 -
Pumo10g02623 734 PANTHER KINESIN-LIKE PROTEIN KLP-3 114 697 IPR027640 GO:0003777|GO:0007018
Pumo10g02623 734 Coils Coil 590 617 - -
Pumo10g02623 734 MobiDBLite consensus disorder prediction 667 695 - -
Pumo10g02623 734 Gene3D - 101 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02623 Pumo-Chr10 48618305 48623368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02623 248 617 Calmodulin-binding Proteins AT5G65930 38.624 2.18e-67 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02623 K10406 - gmx:100819914 1046.96