Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02591 ATGGATCAAAACCAGCATGGTGAAGCAGTAAGAGGGATTGGTCCTCTAGCACATGGGAAGAGCGAATATCAATGTAACCCCATTATGACACCTACAAATTCTCCAACTCAGGTCGTTGGTCCTTCTGTCCCTTCCTACCCTAGAGAGCAACAATATGCTCCCCAATACATCTACCAGCCGCAGAATGAACGCTTGAAGGAACAACTCAATGACTTCTGGGAAAAACAGTGCCAGGAAATTCAAGAGACAACCAATTTCAGGACTCACAGCTTGCCTTTGGCTAGGATTAAGAAGATAATGAAGGCTGACAAGGATGTGAGCATGATATCAGCTGAGACTCCTGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACAAAGAAGGCTTGGGCTAATGTTGAGGATCACAACAGGAGGATACTTCAGGAAAGTGACATTGCATATGCAATCTCAAAGACTGAAGTGTTTGATTTTCTTGATGATATTGTCCCCAAAGATGCAGGCATACCAAGAACAGGCATAGCTCCAACAGAGAATGTTGATTTAAATATGCCACCTAATCAGAATGTTGCGGGCCCTCCATATGATGCTCCAACAATGGTCATGGGAAGGCCCGTTCCTGATCTAAACCATCATGCTCCCAATTCAGATGATTGA 666 0.4429 MDQNQHGEAVRGIGPLAHGKSEYQCNPIMTPTNSPTQVVGPSVPSYPREQQYAPQYIYQPQNERLKEQLNDFWEKQCQEIQETTNFRTHSLPLARIKKIMKADKDVSMISAETPVVFAKACEMFIMELTKKAWANVEDHNRRILQESDIAYAISKTEVFDFLDDIVPKDAGIPRTGIAPTENVDLNMPPNQNVAGPPYDAPTMVMGRPVPDLNHHAPNSDD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02591 221 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 61 179 - -
Pumo10g02591 221 FunFam Nuclear transcription factor Y subunit gamma 56 168 - -
Pumo10g02591 221 SUPERFAMILY Histone-fold 59 162 IPR009072 GO:0046982
Pumo10g02591 221 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 90 153 IPR003958 -
Pumo10g02591 221 Gene3D Histone, subunit A 54 168 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02591 Pumo-Chr10 46207749 46208414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02591 1 208 CCAAT-HAP5 Transcription Factor Family AT1G08970 46.296 1.87e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pumo10g02591 CBFD_NFYB_HMF 1.1e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02591 K08066 - gmx:100808341 292.352