Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02589 ATGGATCAAAACCAGCATGGTCAACCAGCACAGGAAGCACATGGCAAGAACCAATATCAATCTAACGAAATGATGGCGCCTACCAATCCTCCAACCCAGAGTGCCGGTCCTTCTGTCCCTGCATCCTACCCTAGAGAGCAACAATATGCTCCACAATACATCCACCAACAGCAACAACAGCAACACTTGCAGCAACAACTCAACAACTTCTGGGAAAAACAGTGCAAGGAAATTGAGGAGGAGACCACTGACTTCAACTTCAAGACTCACAACTTGCCTTTGGCTAGGATTAAGAAGATAATGAAGGCTGACAGGGATGTGAAGATGATATCAGCTGAGACTCCTGTGCTATTTGCCAAGGCCTGTGAAATGTTCTTTATGGAGCTCACAATGAGGGCTTGGGCTAATGCTGAGGAGGACAAAAGGAGGACACTTAAGAAGAATGACATTGCATCAGCAATCACAATGAGTGATATGTTTGATTTTCTTAATGATGTTTTCCCCAGGGATGACACAATGAACCCTCAAGGCGGCATACCGAGAACAGGCACTGCTCCAACACCTACTGAGAATGTTCCTTACTATCATCTGCCACCTCTTCAGTAA 606 0.4554 MDQNQHGQPAQEAHGKNQYQSNEMMAPTNPPTQSAGPSVPASYPREQQYAPQYIHQQQQQQHLQQQLNNFWEKQCKEIEEETTDFNFKTHNLPLARIKKIMKADRDVKMISAETPVLFAKACEMFFMELTMRAWANAEEDKRRTLKKNDIASAITMSDMFDFLNDVFPRDDTMNPQGGIPRTGTAPTPTENVPYYHLPPLQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02589 201 SUPERFAMILY Histone-fold 39 163 IPR009072 GO:0046982
Pumo10g02589 201 FunFam Nuclear transcription factor Y subunit gamma 53 169 - -
Pumo10g02589 201 Gene3D Histone, subunit A 52 169 IPR009072 GO:0046982
Pumo10g02589 201 MobiDBLite consensus disorder prediction 174 201 - -
Pumo10g02589 201 MobiDBLite consensus disorder prediction 1 44 - -
Pumo10g02589 201 Pfam Core histone H2A/H2B/H3/H4 42 154 IPR007125 GO:0003677
Pumo10g02589 201 MobiDBLite consensus disorder prediction 1 41 - -
Pumo10g02589 201 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 47 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02589 Pumo-Chr10 45846530 45847135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02589 1 198 CCAAT-HAP5 Transcription Factor Family AT1G08970 53.500 9.21e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pumo10g02589 Histone 1.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02589 K08066 - gmx:100808341 232.646