Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02580 ATGGCCGAGGTTATGAACGCGCCTTCCGAATCCCTCGACAAATCCCCTTCCTCATCTGCTCCGCCTCCTCCTCCGCCACCGCCTCCTCCGACCTCCTCCGCCGCGGACGACCTCCCGCCTCCTCCTCCTCCTCCGCCGCCGCATTACCCTCCCCGGCGACGGGACCGGCGAGACGACAGGGATTTCGATCGCCCTCCCAACCGCCGCGGTGATTACTACGACCGGAACGCGTCGCCGCCGCCGCCACCGCGAGACAGGGACAGGGACTTCAAGCGCCGCCGCAGCCCCAGCCCTCCCCACCGCGACCGGCGCTATTCCCCGCCGCCACGGCGGTCGCCTCCGCCGTACAAGCGGTCGCGCAGGGGGAGCCCTCGTGGCGGGTATGGACCTGATGATAGACATGGATATGATTATTATGGTGGTTATGAACGGGGAATGGGTGGAAGAGGTGGTTATGCAGATGGCAGGTTTGGACCACGTTCTGCAGGGGGGTATCAAAATGGGATTTCCGATGTGGAATCCAATCGTGGTTATGGAGACATGCCAGGTGGTGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCAGCTGAAGCGGAGCGTAGGTATCAAGAATACAAATCAGAGTATATCTCGACCCAAAAACGAGCTTATTTTAATGGTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGGTTACAGTCATTGAAAAGAGGAATGAAAATGCTCGACAGCTAGCAAAGGATTTTTTGCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTAAATGCCTCTATAACAAGTAAATCAGGGCAAGCTGGTGAGCCAAATTCAGAGGAGGAAGCAGACACTGGAGGTAAACGAAGAAGGCAGGGTAGGGGATCCAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATCAGTTCTGAACCAAGACGGATACAAGCTGATGTTCAACAGGCTCAGGCCCTTGTTCGCAAGCTTGACTCAGAAAAGGGGATTGAAGATAATATTTTATGCAGCAGTGATCACAATAAAAATGATGATAAGGCTCACAGTGGATCTGTGGGTCCCATGGTAATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGATGAGCTTCTGGATACACTCATTACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAAGCTAAGGGCTTTAGGCATGTGAGACCGGAAGGGACAGGGCATGAAGTAGCAGGTAAATCAGGGTCTGACTGGGAGAAGAAACTTGACTTATTTTGGCAAGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAGCGGAAGTATTGGATCCCTTTGTTCGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTGTTGTGGATCACACTTCCAAAGTACGAGAGGATCTCTATTTTCAAAATTACATGAATGATAAAGATGCTCCTGGTGGGACGCCCATCATGCAGCAACCTCAGAAGGGCAGGCCTTTAAAGCGAAGAGGTCTTGAGGGCCGATTGAGAGATGATCGTGGTAATCAGCGAGACCATGACCGGGGTGACAGAATGAATGGAGACAGGCCTGATAATTCCCCATCCCATGAAGCCACGATGGGAAACCGTGATGAAACAATGTATGATTCATATGCAGGGCCAGGTGTACCTCCATTTGCCTCAGATATACCTCCACCTGTGTTGATGCCTGTCCCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCCCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGACCATCATATGATGCACCTGGAAGAAATATGCGCACTGGCCCTCCTATGGGTGGAGGACCATCAATAATTGCTGTTCCTCCAACTTTTAGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCAGAGGACGAGGTCACTGTGATAGACTATCGGAGTTTGTAG 2157 0.4998 MAEVMNAPSESLDKSPSSSAPPPPPPPPPPTSSAADDLPPPPPPPPPHYPPRRRDRRDDRDFDRPPNRRGDYYDRNASPPPPPRDRDRDFKRRRSPSPPHRDRRYSPPPRRSPPPYKRSRRGSPRGGYGPDDRHGYDYYGGYERGMGGRGGYADGRFGPRSAGGYQNGISDVESNRGYGDMPGGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNGHKDEEWLKDKYHPTNLVTVIEKRNENARQLAKDFLLDLQSGTLELNPGLNASITSKSGQAGEPNSEEEADTGGKRRRQGRGSNKENDFSAAPKAHPISSEPRRIQADVQQAQALVRKLDSEKGIEDNILCSSDHNKNDDKAHSGSVGPMVIIRGLTSVKGLEGDELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPEGTGHEVAGKSGSDWEKKLDLFWQGRLNGQDPLEVMTAKEKIDAAAAEVLDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVVDHTSKVREDLYFQNYMNDKDAPGGTPIMQQPQKGRPLKRRGLEGRLRDDRGNQRDHDRGDRMNGDRPDNSPSHEATMGNRDETMYDSYAGPGVPPFASDIPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPSYDAPGRNMRTGPPMGGGPSIIAVPPTFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02580 718 MobiDBLite consensus disorder prediction 544 617 - -
Pumo10g02580 718 Pfam SERRATE/Ars2, N-terminal domain 195 276 IPR021933 -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 124 139 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 80 108 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 17 48 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 299 315 - -
Pumo10g02580 718 PANTHER ARSENITE-RESISTANCE PROTEIN 2 52 716 IPR039727 GO:0006397
Pumo10g02580 718 MobiDBLite consensus disorder prediction 659 695 - -
Pumo10g02580 718 Pfam Arsenite-resistance protein 2 437 619 IPR007042 -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 281 340 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 1 151 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 281 296 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 164 186 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 563 595 - -
Pumo10g02580 718 MobiDBLite consensus disorder prediction 49 71 - -
Pumo10g02580 718 ProSitePatterns Zinc finger C2H2 type domain signature. 499 522 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02580 Pumo-Chr10 45454952 45461561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02580 65 718 C2H2 Transcription Factor Family AT2G27100 63.811 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02580 K27103 - gmx:100788714 1066.22