Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02565 ATGCATCTCTCATCTAACAGACTCATGAAAGGAATGGAGAACATCCCAAGTCTCAGGGAGGAAACTCCTCTTAGTGAATCCTTAGAAACTGTGTTAAGTCTCAATGGCCAGACAAAAATTGAAATGGCCTCTTCCACTCTCAAAGATGATGGTGAGGAGCCTTCCAGCTCTTCTATGAGATCTAAGGAAATAGAGCAGGTTGGTTTGGCACAACACTCTAATGGTTTAGTTCCTTTACATTCACTTCATTATTATCCTGTTCCTTCATGGTCTTACCAATGGAATCCATGTTGGAATGTCAAGGAGTTTAGGCCTAGTAGCATAAGTTCTAGACCTGTTTACACAGGTTCTCCAACTATGATGGCAGTTCCTGGCTTCTCCATACCAACAGTAATACTACCAGCAGCACCTTATTCGTATTCGGGTTTTATGTCAAGCTGGGCTGACCAAAAGGAAGAGGCTTCATTGGTTGGATCTGCATTTAGTGGCATCTCATTGTCTTCATCTTCAGTTAGCAACAGTACCTGTTCTGGTAATAGGTCCCCAACATTAGGAAAACATTCTAGAGATGGAAGTACACCGGGGGAAGATGCAATGAAACAGAATCTTTGGGTGCCTAAGACGGTAAGAATCAATGACCCAGAAGAGGCTGCAAATAGTTCCATATGGTCAACTTTGGGAACAAAGTCTGAACAGAACAAACTCATTATGAAAGGAAGTGTTTTTAAATCATTTGAACCTAAGTCAAGTGCCAGTCCTCATATTTTAGATGATAATCAAATTCTAAGGGCAAACCCTGCTGCTTTCTCGCGCTCTGAATCTTTTCAGGAAAGCATGTAA 840 0.4155 MHLSSNRLMKGMENIPSLREETPLSESLETVLSLNGQTKIEMASSTLKDDGEEPSSSSMRSKEIEQVGLAQHSNGLVPLHSLHYYPVPSWSYQWNPCWNVKEFRPSSISSRPVYTGSPTMMAVPGFSIPTVILPAAPYSYSGFMSSWADQKEEASLVGSAFSGISLSSSSVSNSTCSGNRSPTLGKHSRDGSTPGEDAMKQNLWVPKTVRINDPEEAANSSIWSTLGTKSEQNKLIMKGSVFKSFEPKSSASPHILDDNQILRANPAAFSRSESFQESM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02565 279 Coils Coil 272 279 - -
Pumo10g02565 279 MobiDBLite consensus disorder prediction 169 188 - -
Pumo10g02565 279 PANTHER CYCLIC DOF FACTOR 2 6 278 IPR045174 GO:0003700|GO:0006355
Pumo10g02565 279 MobiDBLite consensus disorder prediction 169 198 - -
Pumo10g02565 279 MobiDBLite consensus disorder prediction 45 59 - -
Pumo10g02565 279 MobiDBLite consensus disorder prediction 42 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02565 Pumo-Chr10 44947916 44948755 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02565 168 279 C2C2-Dof Transcription Factor Family AT3G47500 44.538 2.26e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02565 - - gmx:102664782 469.929