Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02531 ATGAATTATAGTCTAAAAGAGGCTTTCAATAAGGATCATGCTTGTGCAAATTCACCCAATAATTTAGAAAGTCATGTCAAAAAGGTAAATCAAGATACAAATGATGTCTCCATAATTGACTACACAACTAGTGGAGTAAGAGAAATGGATCAGGTTCTTAAAAATAATGCAAAGGTGACAAGTAAACAAACATCTAAAACTCACAAGTTAGAAAATCCTATTAAGAACATTTCTGATTTTTCCACTACTCAACACCCAAGTCCAAGTGCAAGAATGACTTCAAATTCTAACCCTTCAACCACCTCATCAGGAGTAATAGCAGAAACTACAAGAGAGTTTCCTATACCTACAAAAAGCACCAATCAAGGTCAAAGAAGTGGCACTAATTCTCGTAGTGATAGTATAGAGAGCACTAGTAATGCACATATCAAGCCACATACAGGAGGCGATGTAAGGTGGGATGCAATTAACATGGTTTCTAGGGGTAATGGTCTTAATCTTAGTCATTTCAAGCTTCTAAAGCGCGTTGGATATGGAGATATTGGAAGTGTGTACCTTGTAGAACTTAAAGGAAGTAAGGCATTCTTTTCCATGAAAGTAATGGATAAAGCATCACTTGCAAGTAGAAATAAGCTTTTAAGAGCACAAATAGAAAAGGAGATTCTTGGACTTCTTGACCACCCATTTTTACCAACTTTATATTCTCATTTTGAGACTGATAAATACTACTGTTTGGTCATGGAGTTTTGTAGTAATGGTAGTCTACATTCTCTTCGGTTGAAGCAACCTAACAAGCATTTCACTGAAGAAGCTGCACAGTTTTATTGTTCGGAGATTTTGTTAGCTTTGGAATACTTGCACATGCTAGGCATTGTGTATAGAGACTTAAAACCAGAGAATGTTTTAGTTCGAGATGAAGGAACACACGAGTATCTTGCACCAGAGATTATTCGTGGTGAAGGACATGGTAGTGCAGTGGATTGGTGGACATTTGGGATCTTCTTGTATGAGCTTTTGCATGGGATAACACCCTTTAAAGGTGTAGGAAATAAAGCCACGCTTTTTAATGTTGTAGGTCAACCCTTAAGGTTCCCAGAAAAACCCCATGTTAGTAATGTTGCAAGAGACCTTATAAAAGGGTTGTTGGTGAAAGAGCCGCAAAAACGATATGCTTATAAGAGAGGTGCCACAGAAATAAAACAACACCCTTTTTTTAATGGAGTGAATTGGGCTCTAGTTAGAAGTGCTACACCTCCTATTATATCAAAACCTTTAAATTTTTCTAAGTATGATAGAAAAGCAAATGTTCCCCCAACAGACAAGAAGATCGTAGATATTGTTGCAAGTGATAAAAGTAAGCGTACACAACCTAATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1404 0.3661 MNYSLKEAFNKDHACANSPNNLESHVKKVNQDTNDVSIIDYTTSGVREMDQVLKNNAKVTSKQTSKTHKLENPIKNISDFSTTQHPSPSARMTSNSNPSTTSSGVIAETTREFPIPTKSTNQGQRSGTNSRSDSIESTSNAHIKPHTGGDVRWDAINMVSRGNGLNLSHFKLLKRVGYGDIGSVYLVELKGSKAFFSMKVMDKASLASRNKLLRAQIEKEILGLLDHPFLPTLYSHFETDKYYCLVMEFCSNGSLHSLRLKQPNKHFTEEAAQFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGITPFKGVGNKATLFNVVGQPLRFPEKPHVSNVARDLIKGLLVKEPQKRYAYKRGATEIKQHPFFNGVNWALVRSATPPIISKPLNFSKYDRKANVPPTDKKIVDIVASDKSKRTQPNSSYEDFEYF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02531 467 SUPERFAMILY Protein kinase-like (PK-like) 163 432 IPR011009 -
Pumo10g02531 467 MobiDBLite consensus disorder prediction 74 144 - -
Pumo10g02531 467 Gene3D Transferase(Phosphotransferase) domain 1 307 422 - -
Pumo10g02531 467 FunFam serine/threonine-protein kinase D6PK-like 303 423 - -
Pumo10g02531 467 ProSiteProfiles Protein kinase domain profile. 170 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02531 467 Gene3D Phosphorylase Kinase; domain 1 168 253 - -
Pumo10g02531 467 SMART serkin_6 170 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02531 467 Pfam Protein kinase domain 171 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02531 467 Pfam Protein kinase domain 306 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02531 467 FunFam Serine/threonine-protein kinase D6PK-like 168 253 - -
Pumo10g02531 467 Gene3D Transferase(Phosphotransferase) domain 1 254 306 - -
Pumo10g02531 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Pumo10g02531 467 MobiDBLite consensus disorder prediction 57 147 - -
Pumo10g02531 467 PANTHER FLIPPASE KINASE 1-RELATED 28 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02531 Pumo-Chr10 43423550 43426371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02531 3 434 AGC Kinase Gene Family AT5G58140 35.375 2.96e-92 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo10g02531 Pkinase 3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02531 - - gmx:100802478 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02531 10 43423550 43426371 Pumo10g02531 10 43423550 43426371 ECH