Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02529 ATGAAGTACGTGTTGGTGACAGGCGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCAAGCAGTATTGGGGTGCTCCTTAAGGCTTGTGGCTTTCGGGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAAGTGTTTGTTTTAGATGATGGCGGCGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCCTGGACCTCAAATTAACTCGTGACAATAATATCACAACTGGAAAAATATATCAGTCTGTTATTGGAAAGGAGAGAAGAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATCACTGATGCCATCCAAGAATGGATAGAGCGTGTGGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTCTGTGTCATTGAGTTGGGTGGAACTATTGGGGATATCGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTAATTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTCCGCCAACTTAGAGGGTTAGGGTTGACCCCAAATCTTCTTGCATGTCGCAGTTCAAAGGAACTTGATGACAATGTTAAGGAAAAACTTTCTCAATTTTGTCATGTTCCGTCATCAAGCATACTAACTCTCTATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGACCAGAAGGCGCATGAGGCAATCCTGAAAACATTAAACCTGCGAGGTGTTGCTACAGAGCCTAATTTTAAGGAGTGGATTGCAACAACAAAAGTATATGACAAATTTCATGAATCAGTTAGAATTGCAATGGTGGGAAAATATACTAACCTTTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTGTTGCTTGCAATCGTAAGCTTGTTGTGGATTTGGTTCCTGCTGAACATCTTGAAGATGATACCTCTAAAGAGGATCCTGAATCATATAAAGCTGCTTGGGGTCTTTTGAAGGGTGCTAACGGGATTCTAGTTCCAGGAGGTTTTGGTGACAGGGGAGTGGAAGGAAAAATTCTTGCTGCTAAGCATGCTAGAGAAAATAGCGTTCCATTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAATTTTCAAGATCTGTTCTTAGTCTTCATGATGCTAATAGCACAGAATTTGACCCCAAAACCAAAAATCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGACTTGGTTCAAGGAGAACTTACTTTCACATTGCTGACTGCAAATCGGCCAAGTTGTATGGTAATGCAGGCTTTGTTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGATATGATATCACAACTTGAGAGTGCTGGTCTATGTTTTGTTGGCAAAGATGAAACTGGGAAGCGCATGGAGATAGTTGAATTTTCGGGCCATCCTTTCTTCATTGGTGCTCAGTTTCATCCTGAGTTCAAGTCGAGACCAGGGAAACCTTCTCCATTATTCTTAGGATTAATAGCAGCAGCATGTGAGAGGACAGTTGTGCCTGCAAGCAAAGGGTATGGCAAGTTAACAAATGGGGTTATTAATGCACACTCACCAATGTTGAAAGCACATAATGGAAATGGGTTCAAATCTCCCAATAGTTCCTTAAATGGTGTATATACAAGTACAACTACCAATGGGGTGTGTGTTGATGGGAGCTGTTAA 1821 0.4245 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIGKERRGDYLGKTVQVVPHITDAIQEWIERVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKEKLSQFCHVPSSSILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLRGVATEPNFKEWIATTKVYDKFHESVRIAMVGKYTNLSDAYLSVLKALLHASVACNRKLVVDLVPAEHLEDDTSKEDPESYKAAWGLLKGANGILVPGGFGDRGVEGKILAAKHARENSVPFLGICLGMQIAVIEFSRSVLSLHDANSTEFDPKTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFHIADCKSAKLYGNAGFVDERHRHRYEVNPDMISQLESAGLCFVGKDETGKRMEIVEFSGHPFFIGAQFHPEFKSRPGKPSPLFLGLIAAACERTVVPASKGYGKLTNGVINAHSPMLKAHNGNGFKSPNSSLNGVYTSTTTNGVCVDGSC 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02529 606 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Pumo10g02529 606 PANTHER CTP SYNTHASE 1 550 IPR004468 GO:0003883|GO:0006221
Pumo10g02529 606 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Pumo10g02529 606 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Pumo10g02529 606 FunFam CTP synthase 295 555 - -
Pumo10g02529 606 Gene3D - 294 556 IPR029062 -
Pumo10g02529 606 NCBIfam CTP synthase (glutamine hydrolyzing) 1 545 IPR004468 GO:0003883|GO:0006221
Pumo10g02529 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Pumo10g02529 606 Gene3D - 1 292 IPR027417 -
Pumo10g02529 606 FunFam CTP synthase 1 292 - -
Pumo10g02529 606 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Pumo10g02529 606 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Pumo10g02529 606 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Pumo10g02529 606 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02529 Pumo-Chr10 43379171 43388287 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02529 K01937 - gmx:100799980 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02529 10 43379171 43388287 Pumo10g02529 10 43379171 43388287 ECH
Pumo4g02722 4 49292313 49300989 Pumo10g02529 10 43379171 43388287 PCT
Pumo10g02529 10 43379171 43388287 Pumo4g02795 4 51547155 51553079 PCT