Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02499 ATGTTTAGTTGTTTATTAAATAGCCGCCATGCCATCATTCAGAAAACAGCTAATTCCTCATTACTACCAATTAATTCTGCACTGAGTCATTTGCATAAGGTGTATTTCAGATTTGCTTGCAATCCTACCGATACCATGGCAGCAGAATTGGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCGTTTGACAGGCTGGCTTCTCGTCAAGTTCTGGACTTCTTTCGTGGAAGAAAGCTCGATGAGACGCTGCTGAGCAAGTTGAACATGAAGCTGCTGTCCATCAATGCTTGTGCTGATGATGCAGAACAAAAGCAGGTCAGAGATTCACGTGTGAGAGCATGGCTTGTTGGTGTCAAAGAGGCTGTGCTTGACGCGGAGGATCTCTTGGATGAAGTAGACCATGAACTCTCCAAACCTGAACCTGAATCTCAATCCTGTACTTGCAAGGTAAACGTACCTTTCTTCAACGCTTCTTTCAGTTCATTCAACAGGAGAATTGAATCAAGGATGAGACAAATCCTTGAAAAACTGGAATTTCTTGCTGGGGAAAAGGGTGATTTGGGTTTGAAAGATGCTACTGATTCTGGTGATGGATCAAGTAGTAGTAAAGTGTTACCAAAAGTGCCATCAACATCTTTGCTTGGTGGAAGTGTTTTATATGGTAGAGATGATGACAAAGAAGTGATCTTTAATTGGCTGATATCTGAGACTGAGAATGGTAACCAGCCATCTGTACTTTCTATTGTGGGGATGGGTGGGATGGGTAAGACCACGCTTGCCCAACATGTATACAACGACCTAAGGATAGAGGGTAAATTTGATATTAAAGCTTGGGTCTATATTTCAGATGAATTTGATATTTTTAAGGTATCAAGAGCAATTCTTGACACAATTACTAAATCAGTTGATGATAGTAGAGAGCTAGAAATGGTTCATGGAAGATTGAGAGAAATTTTGACAGGAAAGAGATTTCTTCTTGTTTTGGATGATCTTTGGAACAAAAACCAAAAGCAGTGGGAAGCTTTGCTAACTCCTCTTAGTTATGGGGCTCCAGGAAGTAAAATTGTTGTCACCACACGTGACATGAAAGTTGCTTCAATTGTCAGATCAAGCAAAATACATCCCCTAAGGCAGTTACAAGATGATCATTGCTGGCAATTGTTCACTGAACATGCATTCCATTACGAAAATCTTCCATCAAATTCGAATTACAAGGCGATTGGTATGAAGATAGTTGAAAAATGCAAAGGACTACCACTAGCCCTGAAAACAATTGGAAGTCTGTTACACAAAGAATCATCTGTTTTGCAATGGAAGAGTGTATTAACAAGCGAGATATGGGAATTTTCTGAAGAAGATAATGAAATTATCCCTGCATTATTATTGAGCTATCACCACCTTCCTGCTTGTCTCAAGAGATGCTTTACTTATTGTGCCTTATTCCCCAAAGGTTATGAGTTTGACAAGGAGGATTTAGTTCTGTTATGGATGGCCGAAAATTTGGTACAATGCCCTCAACCGAGTAATAATATGGTAGAAGTTGGTGCACAATACTTTGATGATCTGTTATCGCGGTCCTTTTTTCAACAATCAAGTGGAGATCAGAAGTGCTATGTCATGCATGACCTTCTCAATGATTTGGCCATAGTCACATAA 1662 0.3995 MFSCLLNSRHAIIQKTANSSLLPINSALSHLHKVYFRFACNPTDTMAAELVGGALLSAFLQVAFDRLASRQVLDFFRGRKLDETLLSKLNMKLLSINACADDAEQKQVRDSRVRAWLVGVKEAVLDAEDLLDEVDHELSKPEPESQSCTCKVNVPFFNASFSSFNRRIESRMRQILEKLEFLAGEKGDLGLKDATDSGDGSSSSKVLPKVPSTSLLGGSVLYGRDDDKEVIFNWLISETENGNQPSVLSIVGMGGMGKTTLAQHVYNDLRIEGKFDIKAWVYISDEFDIFKVSRAILDTITKSVDDSRELEMVHGRLREILTGKRFLLVLDDLWNKNQKQWEALLTPLSYGAPGSKIVVTTRDMKVASIVRSSKIHPLRQLQDDHCWQLFTEHAFHYENLPSNSNYKAIGMKIVEKCKGLPLALKTIGSLLHKESSVLQWKSVLTSEIWEFSEEDNEIIPALLLSYHHLPACLKRCFTYCALFPKGYEFDKEDLVLLWMAENLVQCPQPSNNMVEVGAQYFDDLLSRSFFQQSSGDQKCYVMHDLLNDLAIVT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02499 553 Pfam NB-ARC domain 225 467 IPR002182 GO:0043531
Pumo10g02499 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 480 IPR027417 -
Pumo10g02499 553 Pfam Rx N-terminal domain 56 146 IPR041118 -
Pumo10g02499 553 PRINTS Disease resistance protein signature 417 431 - -
Pumo10g02499 553 PRINTS Disease resistance protein signature 247 262 - -
Pumo10g02499 553 PRINTS Disease resistance protein signature 320 334 - -
Pumo10g02499 553 FunFam Probable disease resistance protein At1g61300 209 374 - -
Pumo10g02499 553 Gene3D - 79 180 - -
Pumo10g02499 553 PANTHER DISEASE RESISTANCE PROTEIN RP 86 550 IPR044974 GO:0006952
Pumo10g02499 553 Gene3D - 380 464 IPR042197 -
Pumo10g02499 553 Coils Coil 165 185 - -
Pumo10g02499 553 Gene3D - 207 376 IPR027417 -
Pumo10g02499 553 FunFam Probable disease resistance protein At1g63360 466 552 - -
Pumo10g02499 553 Gene3D - 465 551 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02499 Pumo-Chr10 42320619 42322280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02499 248 431 WRKY Transcription Factor Family AT5G45050 28.571 1.75e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02499 - - gmx:100777280 669.848