Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02465 ATGGGGACCCAAACTATGGGGTCTCATGGTGGTGGTGGTGGTGGTGGAGACAGTAATGGGAAACAGTCACCACTCCAGCCTCTGGTGCGGCAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTGGGTGATTTGGGGAAGCCGCTAAGTAGTATGAACCTTGATGAGCTTCTAAAAAATGTATGGACCGTCGAGGAAAGCCAGACCATTGGTATGGACAATGAGGGCACAGCACAAGCTGGCCAAGCTGCTCTTCAGCGTCAGGCTAGTCTGTCATTAACTGGTGCACTAAGCAAGAAGACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAATCATTGAGGAGAAGAAGTTCCAAGACAGACATCCTACTTTGGGAGAAATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTTGCAGATGCATCTTCTAATAGAAAGAATACTGGTACTATAGCTGGGGTTGATTCAAACGTGGCAGTGCCACAGTTTCCTATGCAAGGACAGTGGATACAATATCCACAATCACAGTATCAGCATCCACCACAAAGTTTAATGGGGATCTATATGCCTAGCCAAGGTATGGTACAGCCATTACACATGGGGCCCGGCGCTTCATTGGATGTTTCATTTGCAGATAGTCAGGCTGCATTGCAATCGCCTCTGATGGGAACAGTGTCAGATACGCAGACTCCTGGAAGAAAAAGGAGCACTCCTGAGGACATGATAGAGAAGACTGTTGAGAGGAGACAGAAGAGGATGATAAAAAACCGAGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGTCTGGAAGAGGAAAATGAAAGACTGAAGAAACGAAAGGAGCTAGAGCAGATGTTGCCATGTACACCCCCTCCCGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 981 0.4618 MGTQTMGSHGGGGGGGDSNGKQSPLQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEESQTIGMDNEGTAQAGQAALQRQASLSLTGALSKKTVDEVWRDIQQNKIIEEKKFQDRHPTLGEMTLEDFLVKAGVVADASSNRKNTGTIAGVDSNVAVPQFPMQGQWIQYPQSQYQHPPQSLMGIYMPSQGMVQPLHMGPGASLDVSFADSQAALQSPLMGTVSDTQTPGRKRSTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKRKELEQMLPCTPPPEPKYQLRRIASAPF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02465 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 254 299 IPR004827 GO:0003700|GO:0006355
Pumo10g02465 326 MobiDBLite consensus disorder prediction 1 29 - -
Pumo10g02465 326 MobiDBLite consensus disorder prediction 241 304 - -
Pumo10g02465 326 CDD bZIP_plant_BZIP46 256 310 - -
Pumo10g02465 326 Gene3D - 254 307 - -
Pumo10g02465 326 Pfam bZIP transcription factor 256 300 IPR004827 GO:0003700|GO:0006355
Pumo10g02465 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 259 274 IPR004827 GO:0003700|GO:0006355
Pumo10g02465 326 SUPERFAMILY Leucine zipper domain 256 301 IPR046347 GO:0003700|GO:0006355
Pumo10g02465 326 SMART brlzneu 252 308 IPR004827 GO:0003700|GO:0006355
Pumo10g02465 326 MobiDBLite consensus disorder prediction 228 326 - -
Pumo10g02465 326 Coils Coil 272 306 - -
Pumo10g02465 326 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 325 IPR043452 GO:0003700|GO:0045893
Pumo10g02465 326 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 254 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02465 Pumo-Chr10 40889988 40895612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02465 21 326 bZIP Transcription Factor Family AT3G56850 55.591 4.32e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g02465 bZIP_1 9.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02465 K14432 - gmx:100101875 535.028