Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02452 ATGGCAGAGGACTTGATTTTGTTGGATGAATGGCTTAGTATGTTTGGCATGAGAGCCAGGATAGCACTGGCTGAGAAGGAGATCAAGTATGAGTACAGGGAAGAGGATCTGATGAACAAGAGCCAACTGCTTCTGGAAATGAACCCAATTCACAAGAAGATCCCAGTTCTCATCCATAATGGGAAACCCATTTGTGAGTCCATCATTATTGTTGAGTATATTGATGAGGTTTGGAAGGAGAAAACTCCTTTCCTACCCTCAGACCCTTATCAGAGAGCTCAAGCTAGATTCTGGGCTGATTTTGTCAACAAGAAGGTGCATGAAGCTGGGAAGGGGATATGGGCCTCAAAGTTGGATCAGCATGAGAAGGCCAAGAAGGAACTGAAAGAAAGCTTGAAGCAGTTGGAGGAGGTTCTTGGGGACAAGCCATATTTTGGGGGTGACACATTTGGGTTTCTTGATGTGGCTTTAATCCCTTTCCATCAATGGTTTTATGCTTATGAGACTATGGGTAGCTTCAAATTGGACTGTCCCAAACTCATAGAATGGGCCAAGAGATGTTTGCAAAGAGAAAGCGTATCCAAATCCATTGCTAGTGAAAACGACATCTATGACTTTGTTTTGCGCTATAGGAAAGGGTATGTGTTGGACTAA 654 0.4343 MAEDLILLDEWLSMFGMRARIALAEKEIKYEYREEDLMNKSQLLLEMNPIHKKIPVLIHNGKPICESIIIVEYIDEVWKEKTPFLPSDPYQRAQARFWADFVNKKVHEAGKGIWASKLDQHEKAKKELKESLKQLEEVLGDKPYFGGDTFGFLDVALIPFHQWFYAYETMGSFKLDCPKLIEWAKRCLQRESVSKSIASENDIYDFVLRYRKGYVLD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02452 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Pumo10g02452 217 Coils Coil 118 141 - -
Pumo10g02452 217 Pfam Glutathione S-transferase, C-terminal domain 122 186 - -
Pumo10g02452 217 SFLD Main (cytGST) 2 214 - -
Pumo10g02452 217 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Pumo10g02452 217 FunFam Glutathione S-transferase U20 88 217 - -
Pumo10g02452 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Pumo10g02452 217 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Pumo10g02452 217 CDD GST_N_Tau 5 78 - -
Pumo10g02452 217 FunFam Tau class glutathione S-transferase 1 87 - -
Pumo10g02452 217 Gene3D - 88 217 - -
Pumo10g02452 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Pumo10g02452 217 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Pumo10g02452 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 200 IPR045073 -
Pumo10g02452 217 Gene3D Glutaredoxin 1 87 - -
Pumo10g02452 217 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02452 Pumo-Chr10 39559616 39563133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02452 1 212 Glutathione S-transferase Gene Family AT1G17180 63.084 1.66e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02452 K00799 - gmx:100781460 308.531