Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02439 ATGATGGAACAGTCGAGATTCTACCAACAGTTTCAAAGCAATACCATGGAACCTTGGAATGAGGAGTTCCAGTCGGGATCTCAATCAGTAATTCAGGACCATATGGATGGCATGCATACTATTAGAAGACCATCGGACTATAACACATCAGATGTTAAACCAGTACTTAATTATTCAATACAGACAGGTGAGGAATTTGCTCTAGAATTCATGCGAGATAGGGTGAATCTCAGGAAGCCTGTATTTTCAAATGTTAGTGATTCCAACTCCAATTATGCAACTGGTTGTATGGAACTGAAAGGCGTCTTAGGCATCAGTCATGCAGCGTCTGAAAGTGGGTCAGACATTTCTATGCTCTCAAAAGCTGAGAAAGGTCCAACAGAGTTTAACAGACAGAGTACATCATTACATGGAGACAGAAGCAACTATGGGTCAATTCGATCAATACCAAGAACTTCATTGAATCAGGAGAATACTCGATTTGTACGTGGGTATGGCTCTTCTGTTGGTTCTGACAGCTCATCAATGATGATGAAGTGTCTTTGTAGCTTTGGTGGCAGAATATTACCACGACCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAGAAAGCATTGTTAATCTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTCGATGCTTTGGTATCAGTATCGTCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAACGCTCACAAAAGCTTAGGTTGTTTTTGTTCTCAATGAGTGATTTAGAAGATGCTCAGTTTGCTCTCAGTAGCATTGGTGATGATTCTGAGGTCCAATATGTTCTTGCTGTTAATGCTATGGACTTTGGATCGAGAAACAGCTCAACCCCACTTGGTGTCAGTTTTTCAGCAGATGATCTACATGAATTGGAAAGGCAAACTACAGAGAGGGAGACTAGTAGAGATGCTGTAGAATCTATAAGTGTCAGCAATGCTCCCTTGACTAATAAATCTGACTCTTCATTGACTATTCATTCTTCGCAACCAGTTCTACCAAATGCCTCAAATGCTTATGAAATCAATCAACTGTCTTATGGTGACCAAATGGCACAAGTTGGGGACTATAGTCGTCAATATTTTGTTCACCATGGCCTTAATTCCAGTCATAACCCTGTTGTTGGAGAGACTCCTATTCCTATGGCTCCTCATCTGCTGAACAATCAACAAGTGGTTCTGAATGAAGATAATCTATCTAGTGGATTACAAATACAAAATCCTCAGTTATCTACAATGCAGGTTAAAAAGATAAGTAGTAGTTCAGTTAAACAAGGGAGTGACCCTGGTAAAGTTTTATCCTCGGAAACCCCATCCCCAGCTCCCTCACAGCCCTTTGATAGTTGCTTGAAAAGTAATTTTCCTGAAGCATCGGTTGTAGTTACCATGCCTGAGGGGCATCTACCTTCATTGCCTTCAACAAAAAAGGTTCAGCTCAAGGATTATGAAGAGGCATCTTCTACTTCTAGCAGTGCATTTGCTCCTTCTTATGTTGATTCCCACACCAATGCAATTGATCTGAGTTGTCTTCATCCTCCTCCACTTCCTGAGAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTGGAGTTGCTGAATCGTTCCTCTAAGTCAGATGACACACACAGTTCTCAAATTCATGTGTCAGATTTACTTTCTGATGTCAACCCAGAGGATCCAGCAACAGAATCTGGTGACAACTTGCATGATGGTAAAATGTTAAATCCAACTGAGGAATTGGGTACTGTGGCAAAGCCCTTGCTTGCAGATGGCCATACCATTGACAATGGGCTTTCCAAAAATCAAATGAGCAAACCATTGCCTGATACAAACAGTCTGGTTAAGTCAAAACTATCTGAGCACACAGATCCTGAGTTGAAGTCGGTGTTGCCAAGCAATGAAGGAACTAAAGATGTTGAAACTGAAAATAATCACAAAGATAACCACACCAAACCCTTGGTTGATGAAACTGAAACCAAAACCAAAGATGGTAAATCAGATCTTCCTGCTTTGCATCATGTTTCCTCTGGTAAGTGTCTTGATGATCTAGCATCCAATCTTCCAGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCTAATGATGGTTGTATGGTACAAGAACTACCTGTATCTGTAACTGGGAACATAACCAAAGATGTTTATCAAGATTTCCCTCTAAATGTTGTTTCTGAACAATCTCAAGGTGACATTCTTATTGATATTGATGATCGATTTCCCCGGGAAATACTTTCTGATATGTTTTCTAAAGCAATACTTGGAGAAGATTCCTCCAGTCTACATCCACTGTCCGGAGATGGAGTAGGCTTGAGCATAAATATGGAAAATCATGAACCTAAAAGATGGTCATATTTTCAAAAGTTAGCACAAGAAGGGCTTGATAATGTCTCTCTTATTGATCAGGATCATCTTGGTTTTTCACCGGTGATAGGAAAAGCAGGAGATGATAGAACCCATCAAGTTACGCCGCTAACAACTGATGGACATCCTCTACATCATGAAGATTCCCATCTCAATTTCAATGAAGAAAATCAAGAGGACTTACATAGAAGGATTGGAACTGAAACCACTGTTCTGAAGTCCAATTATAATCAATCCCAACTTAAGGACAACGAGAGTATACAGTTTGATGCTATGATGGAAAATCTAAGGACACTAGAGTCAGAGTTTGAGGATGGCAAATTTGATGCAAAAAATAGCAATCTACCTCCACTTGATCCTTCTTTCGGAGATATTGATTTAAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGGCATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGAGGAACAATGGCCACTGTGGCAGAATACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATTCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTCGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAGATTAAACGAAATACCTTGGTTACTGGTGGTGTGCGTGGGACTCTACCATGGATGGCACCAGAGCTGCTGAATGGCAGCAGCAGCAAGGTCTCTGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTGACGGGTGAGGAGCCATATGCTAATATGCACTACGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACCATCCCAAGTAACTGTGATCCTGAATGGAGAACTCTAATGGAACAATGTTGGGCACCCAACCCTGCAGTCAGACCATCCTTCACCGAAATCGCCAGTCGTCTGCGCATAATGTCAGCAGCAGCAGCTAGCCAAACCAAAACACAGGGCAATAAAGCATCTAAATGA 3765 0.4098 MMEQSRFYQQFQSNTMEPWNEEFQSGSQSVIQDHMDGMHTIRRPSDYNTSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPVFSNVSDSNSNYATGCMELKGVLGISHAASESGSDISMLSKAEKGPTEFNRQSTSLHGDRSNYGSIRSIPRTSLNQENTRFVRGYGSSVGSDSSSMMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSQKLRLFLFSMSDLEDAQFALSSIGDDSEVQYVLAVNAMDFGSRNSSTPLGVSFSADDLHELERQTTERETSRDAVESISVSNAPLTNKSDSSLTIHSSQPVLPNASNAYEINQLSYGDQMAQVGDYSRQYFVHHGLNSSHNPVVGETPIPMAPHLLNNQQVVLNEDNLSSGLQIQNPQLSTMQVKKISSSSVKQGSDPGKVLSSETPSPAPSQPFDSCLKSNFPEASVVVTMPEGHLPSLPSTKKVQLKDYEEASSTSSSAFAPSYVDSHTNAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQIHVSDLLSDVNPEDPATESGDNLHDGKMLNPTEELGTVAKPLLADGHTIDNGLSKNQMSKPLPDTNSLVKSKLSEHTDPELKSVLPSNEGTKDVETENNHKDNHTKPLVDETETKTKDGKSDLPALHHVSSGKCLDDLASNLPEIDWGEASGKESNDGCMVQELPVSVTGNITKDVYQDFPLNVVSEQSQGDILIDIDDRFPREILSDMFSKAILGEDSSSLHPLSGDGVGLSINMENHEPKRWSYFQKLAQEGLDNVSLIDQDHLGFSPVIGKAGDDRTHQVTPLTTDGHPLHHEDSHLNFNEENQEDLHRRIGTETTVLKSNYNQSQLKDNESIQFDAMMENLRTLESEFEDGKFDAKNSNLPPLDPSFGDIDLSTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREAGILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDSAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDPEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSAAAASQTKTQGNKASK 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 634 654 - -
Pumo10g02439 1254 SUPERFAMILY Protein kinase-like (PK-like) 960 1234 IPR011009 -
Pumo10g02439 1254 Gene3D - 196 279 - -
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 677 708 - -
Pumo10g02439 1254 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 964 1058 - -
Pumo10g02439 1254 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1059 1252 - -
Pumo10g02439 1254 CDD STKc_MAP3K-like 977 1234 - -
Pumo10g02439 1254 Coils Coil 915 935 - -
Pumo10g02439 1254 Pfam PB1 domain 194 277 IPR000270 GO:0005515
Pumo10g02439 1254 SUPERFAMILY CAD & PB1 domains 193 281 - -
Pumo10g02439 1254 ProSiteProfiles Protein kinase domain profile. 971 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02439 1254 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 197 279 - -
Pumo10g02439 1254 Gene3D Phosphorylase Kinase; domain 1 964 1058 - -
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 344 367 - -
Pumo10g02439 1254 PRINTS Tyrosine kinase catalytic domain signature 1053 1066 IPR001245 GO:0004672|GO:0006468
Pumo10g02439 1254 PRINTS Tyrosine kinase catalytic domain signature 1161 1183 IPR001245 GO:0004672|GO:0006468
Pumo10g02439 1254 PRINTS Tyrosine kinase catalytic domain signature 1205 1227 IPR001245 GO:0004672|GO:0006468
Pumo10g02439 1254 PRINTS Tyrosine kinase catalytic domain signature 1090 1108 IPR001245 GO:0004672|GO:0006468
Pumo10g02439 1254 CDD PB1_UP2 181 277 - -
Pumo10g02439 1254 ProSitePatterns Protein kinases ATP-binding region signature. 977 1002 IPR017441 GO:0005524
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 455 487 - -
Pumo10g02439 1254 SMART PB1_new 192 279 IPR000270 GO:0005515
Pumo10g02439 1254 SMART serkin_6 971 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02439 1254 Pfam Protein tyrosine and serine/threonine kinase 972 1234 IPR001245 GO:0004672|GO:0006468
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 569 613 - -
Pumo10g02439 1254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1096 1108 IPR008271 GO:0004672|GO:0006468
Pumo10g02439 1254 Gene3D Transferase(Phosphotransferase) domain 1 1059 1254 - -
Pumo10g02439 1254 PANTHER SERINE-THREONINE PROTEIN KINASE 222 1235 - -
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 569 583 - -
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 632 708 - -
Pumo10g02439 1254 MobiDBLite consensus disorder prediction 332 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02439 Pumo-Chr10 38291256 38302182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02439 2 636 MAP Kinase Kinase Kinase AT1G16270 36.107 1.36e-88 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo10g02439 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02439 - - gmx:100817937 2264.19