Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02438 ATGAAAGTAGAGAGATTACACTTTGCAGAGGAAATTCTAAATATTGTAGCTTATGAGGGTCAAGATAGAATAGAAAGACATGAAAGGGTAGACCAATGGAGAAGGCAATTAGGCCGAGCAGGATTTCAGGTAATGCCACTGAAGTGCACTAGTCAAGTTAGAATGATGCTTTCTGTTTATGACTGTGATGGATATACATTGTCCAGTGAGAAGGGCAATCTTTTACTTGGGTGGAAAGGAAGGCCAGTAATGATGGCTTCTGCATGGCAAGTTGCAAGTGTGTGA 285 0.4105 MKVERLHFAEEILNIVAYEGQDRIERHERVDQWRRQLGRAGFQVMPLKCTSQVRMMLSVYDCDGYTLSSEKGNLLLGWKGRPVMMASAWQVASV 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02438 94 ProSiteProfiles GRAS family profile. 1 90 IPR005202 -
Pumo10g02438 94 Pfam GRAS domain family 1 90 IPR005202 -
Pumo10g02438 94 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 89 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02438 Pumo-Chr10 38281793 38282077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02438 6 94 GRAS Transcription Factor Family AT1G66350 42.391 2.95e-21 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo10g02438 GRAS 8.6e-26 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02438 - - gmx:100814931 187.193