Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02437 ATGATTTCGCCATCCGAAGGCATTGTCCCTGCGAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGATCAACAAGAGGCAGTAGTTTTTAATGATACTGAATTGTGTTCTTCTGATGATGCTACCAGCAGCACTCCTTGCTTGGCTTCTTCAGAGGTTGATGACTTTGTTGACAGCTTCATCAACATGGATCAGTATGAGTATGTGAATGAAGAAGATCAAGGGTCCCAAGAGAAGCATCAAGGTTTTGACCACTTTGTGGTGAATGATGAGGATGAGGCTGAGGCTGATGCATTCTCCATGGTGAATGGTTCCTTTGGATATGTTCCAACCACCTTGGAGGATTCAGAATTGGAGATCTATGAAGATCTCACAACAGCCATGTTGGAGGAAGAGGTTCAAATGTGTGCCCCTTTTGGTGCTATACCTGAGTTTGTGCCTTGTGCACAAGAGGCCAATCTTGGTGTGGACCAAGGGTTAGACTTGGTTCACATGCTTTTGGCCTGTGCTGAAGCTGTGGGGTGCAGAGACAACCAGCAGGCAGAGTTGCTGCTTAGAAAAATTTGGGCTTTGGCAAGTCCTTCGGGAGACGCGCTTCAGCGAGTCTCCTACTGCTTTGCCACAGGATTGAAGTGCAGGTTATCACTTCTTCCTCATAATGTCATTACAAATGGAACACTCACAAGCACTTCCATGGATGTGCCTTTGATCACTAGGGAGAATAAGTTGGAAGCTTTTCAGCTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAACATCACAAGGAAAGAGCTCAATTCACATTGTTGATTTAGGAATGGAGCATACCCTTCAGTGGTCTTCCTTAATAAGGGCCCTTGCTTCAAGGCCTGAGGGGCCACCAATGCTCCGGATCACCGGATTAACCGGCAATGAGGACAACTCAATACTTCAAGCTAGCATGAATGTGCTTGTGGAGGAAGCAAGCTCAATGGGAATGCATCTTGAATTCCACACAATCTCTGAGCCTTCAACTCCTTCTCTTCTTACTATGGAGAAGCTGAACTTGAGAAAAGGTGAAGCTTTATTTGTTAATAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTCCTATCAATAAAAAAGTTAGGTCCAACTGCACTTACAGTGGTAGAGCAAGACACAAACCATAATGGCCCTTTCTTCCTTGGGAGGATTTTTGGAATCACTGCACTATTACTCAGCCATATTTGA 1290 0.4465 MISPSEGIVPARMEQEQGGECQDQQEAVVFNDTELCSSDDATSSTPCLASSEVDDFVDSFINMDQYEYVNEEDQGSQEKHQGFDHFVVNDEDEAEADAFSMVNGSFGYVPTTLEDSELEIYEDLTTAMLEEEVQMCAPFGAIPEFVPCAQEANLGVDQGLDLVHMLLACAEAVGCRDNQQAELLLRKIWALASPSGDALQRVSYCFATGLKCRLSLLPHNVITNGTLTSTSMDVPLITRENKLEAFQLLYQTTPYIAFGFMAANEAICQTSQGKSSIHIVDLGMEHTLQWSSLIRALASRPEGPPMLRITGLTGNEDNSILQASMNVLVEEASSMGMHLEFHTISEPSTPSLLTMEKLNLRKGEALFVNSILQLHKYVKESRGYLKEILLSIKKLGPTALTVVEQDTNHNGPFFLGRIFGITALLLSHI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02437 429 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 115 418 IPR005202 -
Pumo10g02437 429 ProSiteProfiles GRAS family profile. 153 429 IPR005202 -
Pumo10g02437 429 Pfam GRAS domain family 162 418 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02437 Pumo-Chr10 38280463 38281752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02437 157 418 GRAS Transcription Factor Family AT1G66350 36.364 2.48e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo10g02437 GRAS 1.4e-61 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02437 - - gmx:100814931 683.715