Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02434 ATGTTCACCAACCTTAAAGTAAAGCCATCATTCATAAACTTCACTGCACTGAGTCATTGGCATAAGCTGCATTTGAGCATTTCCATTCATCCACTCCACTTCACTCCCCTTCCTACCATGGCGTTAGAATTCGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCATTTGATAGGCTTGCTTCTCGTCAAGTTCTGGACTTCTTTCGTGGAAGAAAACTCGATGAGACGCTGCTGAGCATGTTGAAGATCAAGCTGCTGTCGATCGATGCTCTGGCTGATGATGCAGAACGAAAGCAGTTCAGAGATCGACGTGTGAAAGCATGGCTTGCTGCTGTCAAAGATGCCGTGCTTGACGCAGAGGATGTCTTGGAAGAAATACACTATGAAGTCTCTAAATCCGTAGTGGAAGCTGACTCTGAATCTCAGATCTACATAGGCTGTTCTTTCAAGGTACCGAATTTCCTCAATGCTTCTTTCAGTTCATTTAACAGGAAAATTGACTCAAGGATGAGAGATGTCCTTAAGAATCTAGAATATCTTGCAAGTCAAAGGGGTGATCTAGGTTTGAAAAAGGCTAGTGGTGTTGGTGTTGGATCAGGATCAAGTAGTGATGTGTCACAGAAATTGCCATTAACATCTTTGGTGGTTGATAGAGTTATTTATGGCAGAGATTATGACAAAGAAATTATCTTAAATTGGCTCACATCTGATGCTGACAATTGTAACCAGCTATCAATACTTTCTATTGTGGGCATGGGCGGGGTGGGTAAGACCACACTTGCCCAACATGTATACAATGACCCAATGCTGGAGGAGGCTAAATTTGATATCAAAGTCTGGATCTGTGTTTCTGATGATTTTGATGTTTTCAAGGTAACAAGAACAATTCTTGAGTTAATCACTGAATCAACTAATGATAGTAGAGACCTGGAGATGATTCACAAAAGATTGAAAGAAAAGTTGACAGGGAAGAAATTTCTTCTTGTTTTGGATGACGTCTGGAATGAAAATCAAGAGAAATGGGAAGCTGTGCAGGCTCCTCTGATTAATTGTGCGGCTCAGGGAAGTAGGATCCTTGTCATGACATGCAGTGGGAAAGTTGCTTCTGCCATGTGGTCAAAAGAACATCACCTGAAGAAATTACAGGAAGATCATTGCTGGCAATTGTTTGCTAAACATGCATTCAAAGACGGAATTCCTCAATCAAATCCGGGCTGCAAGGAGATTGGGATGAAGATAGTTGAAAAATGTAAAGGACTTCCTCTTGCCTTGAAAACAATGGGAAGTCTATTACGCAATAGATCATCTGTTTCAGAATGGGAAAGTGTATTGAAAAGCGAGATATGGGAATTTTCAGAAGAGGATAACCATATTGTCCCTACTTTAGCACTGAGCTATCACCACCTCCCTTCCCATCTCAAGATATGTTTTGCCTATTGTGCCTTATTCCCCAAAGATTATGAGTTTGACAAGGAGCTTTTAATTCAGTTATGGATGGCTGAAAATTTTCTACAACACCCTCAACAGAGTAAGAGTCTAGAAGAAGTTGGGGAACAATACTTCAATGATCTATTATCGAGGTCTTTCTTTCAGCAGTCAAGCAACAACAAAACGTATTTTGTCATGCATGACCTTTTCAACGATTTGGCAAAATATGTTTGCGGGGACATGTGTTTCAGGTTAGAAGCCGATGAATCAAAAAGTATACCAACAACAACCTGTCATTTTTCATTTGGAACCTATCACATTCGTTATTTTGATGGGTTTAGGAGTTTGTATAATGCTGAAAGGTTACGTACATTTATGCCAACAGGTTGGAGAATGCGTTCTTTTGCTTTTGGTTTGGATGACAAGATGCCAATAAATGACTTGTTCTCTAAGTTTAAGTTCTTACGTGTCTTATCTTTGTCTCGTTGTTCTGAACTTACAAAGGTGCCTGACTCTGTTGGCCATCTTAAATATCTCCGTTCATTAAACCTTTCCCATACTGGCATAAAAAAACTACCTGATTCAAAGGAACTTATTTATTTAAAGGAACTAGATATTAGTTACTGCAAACAACTTTTAGGGGATGATGGAATTCTGCTATATAATGGGAAAGAGATCACCATTGAGGTTCACAACATGGAAGCGTGGTTACATGAATGGATTGGTCACATCATATCTTATACTTCTCCTAAATACTTGGAAGTTCATTCTCACCAGAATATAAATATTCTCACGAGTAGTATCCATGATTTCCTTGTATCATTGACTATCAAAGATGGTTGTGATTCTCTAACTACCTTTCCCTTAGATTTCTTCCCAACACTCAGCTTGCTTGATCTCACCAGGTGTCCTAATCTGCAGATGATTTCACAAGAGCATGTTCATAATCATCTTGAGGATCTTAGAATCACGGAGTGCCCTCAGTTAGAATCGTTGCCCAAACGCATGCACATCCTCCTTCCATCTCTTACTAAGTTGGTAATAGAAGATTGTCCAAAAGTTGAGTTATTCTCTGACAGGGGTTTGCCATCGAATCTGAATTTGATGCAACTCAATAAATGCTCCAAACTTGTGGCCTCACTGGAAGGGGCTTTCGGAGACAATCCCTCTCTGGAAAGGTTGGACAATTAA 2625 0.3996 MFTNLKVKPSFINFTALSHWHKLHLSISIHPLHFTPLPTMALEFVGGALLSAFLQVAFDRLASRQVLDFFRGRKLDETLLSMLKIKLLSIDALADDAERKQFRDRRVKAWLAAVKDAVLDAEDVLEEIHYEVSKSVVEADSESQIYIGCSFKVPNFLNASFSSFNRKIDSRMRDVLKNLEYLASQRGDLGLKKASGVGVGSGSSSDVSQKLPLTSLVVDRVIYGRDYDKEIILNWLTSDADNCNQLSILSIVGMGGVGKTTLAQHVYNDPMLEEAKFDIKVWICVSDDFDVFKVTRTILELITESTNDSRDLEMIHKRLKEKLTGKKFLLVLDDVWNENQEKWEAVQAPLINCAAQGSRILVMTCSGKVASAMWSKEHHLKKLQEDHCWQLFAKHAFKDGIPQSNPGCKEIGMKIVEKCKGLPLALKTMGSLLRNRSSVSEWESVLKSEIWEFSEEDNHIVPTLALSYHHLPSHLKICFAYCALFPKDYEFDKELLIQLWMAENFLQHPQQSKSLEEVGEQYFNDLLSRSFFQQSSNNKTYFVMHDLFNDLAKYVCGDMCFRLEADESKSIPTTTCHFSFGTYHIRYFDGFRSLYNAERLRTFMPTGWRMRSFAFGLDDKMPINDLFSKFKFLRVLSLSRCSELTKVPDSVGHLKYLRSLNLSHTGIKKLPDSKELIYLKELDISYCKQLLGDDGILLYNGKEITIEVHNMEAWLHEWIGHIISYTSPKYLEVHSHQNINILTSSIHDFLVSLTIKDGCDSLTTFPLDFFPTLSLLDLTRCPNLQMISQEHVHNHLEDLRITECPQLESLPKRMHILLPSLTKLVIEDCPKVELFSDRGLPSNLNLMQLNKCSKLVASLEGAFGDNPSLERLDN 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02434 874 Gene3D - 73 184 - -
Pumo10g02434 874 Pfam NB-ARC domain 226 468 IPR002182 GO:0043531
Pumo10g02434 874 Gene3D Ribonuclease Inhibitor 618 837 IPR032675 -
Pumo10g02434 874 ProSiteProfiles Leucine-rich repeat profile. 656 677 IPR001611 GO:0005515
Pumo10g02434 874 Pfam Rx N-terminal domain 50 140 IPR041118 -
Pumo10g02434 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 482 IPR027417 -
Pumo10g02434 874 SUPERFAMILY L domain-like 543 873 - -
Pumo10g02434 874 PANTHER DISEASE RESISTANCE PROTEIN RP 80 856 IPR044974 GO:0006952
Pumo10g02434 874 Gene3D - 205 381 IPR027417 -
Pumo10g02434 874 PRINTS Disease resistance protein signature 419 433 - -
Pumo10g02434 874 PRINTS Disease resistance protein signature 248 263 - -
Pumo10g02434 874 PRINTS Disease resistance protein signature 322 336 - -
Pumo10g02434 874 PRINTS Disease resistance protein signature 674 690 - -
Pumo10g02434 874 FunFam Probable disease resistance protein At1g61300 206 378 - -
Pumo10g02434 874 FunFam Probable disease resistance protein At1g63360 468 554 - -
Pumo10g02434 874 Gene3D - 468 554 IPR036388 -
Pumo10g02434 874 Gene3D - 382 467 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02434 Pumo-Chr10 38220494 38223118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02434 249 443 WRKY Transcription Factor Family AT5G45050 26.699 7.09e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02434 - - gmx:100783712 840.106