Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02428 ATGGTGTATTATAAACAGGGGGAATCTCATTCTCATTTGTTGCTTGTTTTAAGATACACGTGGTTGTGGCTGTGGTGGACTAGTTGTAATTGTATCCACGTTATTGCTGCATATCACAGTTTGAAGCCCGGGGATACACTGAATTCCACAACCGAGCTGTGTTCAGAAAACGGCAAATATTGCTTGGGTTTTTCCCAATTTACTTCTGCTCGAAACAGCACTTATTTGCGCATATATGCCAAAGGAGAAGGTGAATGGAACATGTGGATTGGTAATAGAAATCAACCAATTGACATGGATTCTGCAGTTCTGTCGCTGAACCACTCTGGTGTACTGAAAATAGAATCCAAAGATAGAAAACCTATCATCCTTTACTCTTCACCACAACCATCCAACAACATTGTGGCCACGTTAAAGGACACAGGCAACTTTGTGTTGCAACAAATTAGTCTCGATGGGACAGAGAGTACTGTGTTGTGGCAAAGTTTTGATTATCCTACTTATACTTTGCTCCCTGGGATGAAGCTAGGAGTCATTCACAAAACTGGTCACAATTGGTCGCTAGTTTCGTCGATTGGTTATTCGAACCCTAGTCTTGGGGCATTCAGGCTTGAATGGGAACCCACAAGAAGAGAATTGATCATCAAGCAACGAGGAAAATTGTGTTGGGCAAGTGGAGAACTCAGAAACAACATAGGATTCATGCACAACACACATTACATTATTGTCTCAAACGATGACGAAAGCTACTTCACAATTACGACTTCAAACGAAGAGTTAACAAGATGGGAGCTATTAAAAACTGGGCAGTTGATAAATCGGAACGGAGAAGATAGTGTTGCGAGGGCTGATATGTGTTATGGGTACAACACAGATGGAGGGTGCCAAATATGGGAGGAGATACCCACTTGCAGGCATCCTGGTGATGTATTTGAACTCAAGGAAGTTTACGTCAATTTAAACCTGAAAATTTTTCTAGCGAATTCGAGTTATGGCCCAAGTGACTGCCAGGATATTTGCTGGAAAAATTGCAGTTGTCATGGATTCACTGATTATTTTGATGATGGAACTGGTTGTATGTTCGTGTATTTTAATTTAACGGAAGGAGCTGATTTTGCAAGTGGGGGCGAAAAATTTAACATATTGGTAAACAACACCCATCACAAAGAGAAAAAAAGAAAAGGAATGGAGCCTAATAACATGGAAGATTTAGCAACTTCAAATAGATTCTGTGATGCCAAAGATCTTGAAGATGAGTTCAAGAAGAGACAAGACCTAAAAGTATTTAACTATACATCAGTTCTATCAGCATCCAATGATTTTTCAACTGAAAACAAGTTAGGACAAGGAGGATTTGGACCTGTTTATAAGGGAATCCTACCAAATGGGCAAGAAGTTGCCATGAAAAGACTTTCAAAAACATCTTCACAAGGAGCTGAGGAATTCAAAACTGAACTAATGCTTATAGGTGAACTTCAGCACATGAATCTTGTACAACTACTTGGATACTGCATTCATGGAGATGAGAGGATTCTAATTTATGAGTATATGGCAAACAAAAGCTTGGATTTCTATCTATTCGATCGTACTAGAAGTAAATTACTTGACTGGAAGAAGCGCTTCAACATAATAGAAGGAATTTCTCAAGGATTACTGTATCTTCACAAGTACTCAAGACTCAAAATCATTCATAGAGACTTAAAAGCTAGTAACATACTTCTTGATGAGAATATGAACCCCAAAATTTCCGATTTTGGATTGGCAAGAATGTTTACCCGACAAGAATCCACAACAAATACTAGTAGGATTGTTGGGACCTATGGTTACATGTCTCCTGAATATGCCATGGAAGGAGCTTTCTCTGTAAAGTCTGATGTGTATAGCTTTGGAGTCTTACTGCTTGAAATTGTTAGTGGAAGAAGAAACACTAGCTTCTATGATGGTGACCACGTTCTAAATCTAATAGGACACGCATGGGAGTTATGGAATGAAGGTGCATGTCTACAATTAATGGATCCATCTCTAAGTGAGTCATCTGATCTTGATGAAGTGCAAAGATGTATCCATGTTGGTCTCTTATGTGTAGAACAACATGCAAATGATCGACCCATAATGTCACAAGTCATATCAATGTTAACAAACAAGAACACAATAGTTACCTTACCTCGAAGACCAGCATTCTATGTTGGAAGGGAAACCTTTGAAGGGGAAATATCTTCTAAATTATTTTGTAAGGATCCAACGAAAGCATTAACCACTTCCACGGAAATAGAATCAAGTGAACATCAAGAGGGAGAGGAAGCATGA 2307 0.3897 MVYYKQGESHSHLLLVLRYTWLWLWWTSCNCIHVIAAYHSLKPGDTLNSTTELCSENGKYCLGFSQFTSARNSTYLRIYAKGEGEWNMWIGNRNQPIDMDSAVLSLNHSGVLKIESKDRKPIILYSSPQPSNNIVATLKDTGNFVLQQISLDGTESTVLWQSFDYPTYTLLPGMKLGVIHKTGHNWSLVSSIGYSNPSLGAFRLEWEPTRRELIIKQRGKLCWASGELRNNIGFMHNTHYIIVSNDDESYFTITTSNEELTRWELLKTGQLINRNGEDSVARADMCYGYNTDGGCQIWEEIPTCRHPGDVFELKEVYVNLNLKIFLANSSYGPSDCQDICWKNCSCHGFTDYFDDGTGCMFVYFNLTEGADFASGGEKFNILVNNTHHKEKKRKGMEPNNMEDLATSNRFCDAKDLEDEFKKRQDLKVFNYTSVLSASNDFSTENKLGQGGFGPVYKGILPNGQEVAMKRLSKTSSQGAEEFKTELMLIGELQHMNLVQLLGYCIHGDERILIYEYMANKSLDFYLFDRTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGLARMFTRQESTTNTSRIVGTYGYMSPEYAMEGAFSVKSDVYSFGVLLLEIVSGRRNTSFYDGDHVLNLIGHAWELWNEGACLQLMDPSLSESSDLDEVQRCIHVGLLCVEQHANDRPIMSQVISMLTNKNTIVTLPRRPAFYVGRETFEGEISSKLFCKDPTKALTTSTEIESSEHQEGEEA 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02428 768 SUPERFAMILY Protein kinase-like (PK-like) 426 729 IPR011009 -
Pumo10g02428 768 Gene3D Transferase(Phosphotransferase) domain 1 517 721 - -
Pumo10g02428 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 406 516 - -
Pumo10g02428 768 SMART blect_4 44 166 IPR001480 -
Pumo10g02428 768 Gene3D - 33 163 IPR036426 -
Pumo10g02428 768 ProSiteProfiles Protein kinase domain profile. 441 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02428 768 Pfam Protein tyrosine and serine/threonine kinase 443 709 IPR001245 GO:0004672|GO:0006468
Pumo10g02428 768 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 141 745 - -
Pumo10g02428 768 CDD STKc_IRAK 447 714 - -
Pumo10g02428 768 SMART serkin_6 441 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02428 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 720 - -
Pumo10g02428 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 32 163 - -
Pumo10g02428 768 Pfam D-mannose binding lectin 88 190 IPR001480 -
Pumo10g02428 768 ProSiteProfiles Bulb-type lectin domain profile. 38 159 IPR001480 -
Pumo10g02428 768 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 187 IPR036426 -
Pumo10g02428 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Pumo10g02428 768 PIRSF SRK 9 298 IPR024171 GO:0004674
Pumo10g02428 768 PIRSF SRK 275 411 IPR024171 GO:0004674
Pumo10g02428 768 PIRSF SRK 381 763 IPR024171 GO:0004674
Pumo10g02428 768 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Pumo10g02428 768 Gene3D Phosphorylase Kinase; domain 1 404 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02428 Pumo-Chr10 37775914 37783337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02428 418 732 Receptor kinase-like Gene Family AT4G11530 56.467 1.19e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02428 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02428 - - gmx:100794677 1285.78