Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02427 ATGGTGTGTTGTAAACAAGGGGAATCTCATTTGTTGCTTGTTTTCAGATACTCGTGGTGGTGGTGGTGGTGGACTACTTGTCTTTGTATCCACGTTATTATCGCTGCAAAACACAGTTTGAAGCCCGGAGATACACTGAATTCCTCAACCGAGCTGTGTTCAGAAAACAGTAAATATTGCATGAATTTTTCCCAATTACCTTCTCAAGACAGCAGCACTTACCTGCGCATATATGCCAAAGGACAAAGTGATTGGGACATGTGGATTGGAAATACAGAACACCCTGTTGAAAAGGATTCTGCTGTTCTGTTGTTAGATCACTCTGGTGTGCTGAAAATAGAATCCAAAGACAGAAAACCCATAGTCCTTTACTCTTCACCACAACCATCAAACAACACTGTGGCCACCTTAATGGACACAGGAAACTTTGTGTTGAAACAACTTCACCTCGATGGGACTGATCAGAGTGTGTTGTGGCAAAGTTTTGATTGTCCTACTGATACTCTGCTCCCTGGGATGAAGTTAGGAGTCGGTCGCAAAACTGGTCGTAATTGGTCACTAGTTTCGTGGTTGGGAGAGCACAACCCAAGTCTTGGGCCATTCAGCCTTGAATGGGAACCTGCAAGAAGAGAATTGGTCATCAAGCGACGAGGACGATTGTGCTGGACGAGCGGAGAACTCGGAGACGGTGGATTCTTGCACGACACACAGTACGCGATTGTCTCTAACGAAAACGAAAGCTACTTCACAATTGCAGCTTCAAATGAAGAGCTCACAAGATGGGCACTGTTAGAAACTGGGCAGCTGATAAATCGGAACGGAGAAGATGTTGCAAGGGCCGATATGTGTTACGGGTACAACACAGATGGAGGGTGCCAAAAATGGGAGGAGATACCCTCCTGCAGGCATCCTGGTGATGCATTTGAGATCAAGCTAGGTTACCCCAATGCCGCGAACCTGATGAGAAGCAATCTAGCAAATTCGAGTTATGGCATAAGCGATTGCAAGGATATTTGCTGGAGAAACTGCAGTTGCGTTGGATTCAAAGAATATTATGATGATGGAACTGGTTGCACTTTCTTTCATTGGAATTTATCTGAAGGTACTAATTTTGCTAGTGGGGGCATGCAGTTTTACATGCTGGCAAGGAACACCCATCACAAAAGTACAAGAAGGTGGATATGGATAAGCACAGCGATAGGAACTGCTTTACTCATAATCTGCCTTCCCATGCTTTGTCTGGCCTTAAAGAAAAGAAAATATGTGTTCAAAGGAAAAAGCAAAAAAGAAATGGAGACTGAGATACTAGAGTTAACTACTTCAAAGAGATGCTTAGGTATCAAAGATCTTGAAGGGGATTTGCAGAGGGGATATGATTTAAAAGTATTTAACTATACATCAATTCTGGTGGCGACCAATGGTTTTTCATCTGAACATAAGTTAGGAGAAGGAGGCTTTGGACCTGTTTATAAGGGTATCCTTCCAACAGGGCAAGAAGTTGCTATAAAAAGGCTTTCAAGATCTTCTGGACAAGGAATGAAAGAATTTAAAAGTGAACTAATGCTCATATGTGAACTTCAACACATAAATCTTGTACAGCTACTTGGTTGCTGCATTCATGAAGAAGAGAGGATTCTAATTTATAAGTATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGAAGATTGTACTAGAAGCAAGTTACTTGACTGGAAGAAGCGTTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAGTACTCGAGACTTAAAGTCATTCACAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGATTGGCAAGAATGTTTATGCAACAAGAATCCACAGGAAATACTAATAGGATTGTTGGAACATATGGTTACATGTCTCCTGAATATGCCATGGGAGGAATTTTCTCTACAAAATCTGATGTCTATAGCTTTGGAGTGTTGCTACTTGAAATTGTCAGTGGAAGAAGGAACACTAGCTTCTATGATGCCGACCACCCTCTAAACCTAATAGGACATGCATGGGAGTTATGGAATCAAGGTGTGCCTCTACAATTAATGGATCCATCACTGAATGATTCTTTTGATCCAGATGAAGTGAAAAGATGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCCACAATGTCTAATATCATATCAATGTTTAAAAATGAAAGTGCACTAGTTACGTTACCTCGAAGGCCAGCATTCTATGTGGAAAGAGAAAACTTTGATGGCAAAACATCTTCCAATGAGTTATGTGTTGACTATATAGACGAAATTACTGCTTCCTCTGAAATATAA 2379 0.4056 MVCCKQGESHLLLVFRYSWWWWWWTTCLCIHVIIAAKHSLKPGDTLNSSTELCSENSKYCMNFSQLPSQDSSTYLRIYAKGQSDWDMWIGNTEHPVEKDSAVLLLDHSGVLKIESKDRKPIVLYSSPQPSNNTVATLMDTGNFVLKQLHLDGTDQSVLWQSFDCPTDTLLPGMKLGVGRKTGRNWSLVSWLGEHNPSLGPFSLEWEPARRELVIKRRGRLCWTSGELGDGGFLHDTQYAIVSNENESYFTIAASNEELTRWALLETGQLINRNGEDVARADMCYGYNTDGGCQKWEEIPSCRHPGDAFEIKLGYPNAANLMRSNLANSSYGISDCKDICWRNCSCVGFKEYYDDGTGCTFFHWNLSEGTNFASGGMQFYMLARNTHHKSTRRWIWISTAIGTALLIICLPMLCLALKKRKYVFKGKSKKEMETEILELTTSKRCLGIKDLEGDLQRGYDLKVFNYTSILVATNGFSSEHKLGEGGFGPVYKGILPTGQEVAIKRLSRSSGQGMKEFKSELMLICELQHINLVQLLGCCIHEEERILIYKYMPNKSLDFYLFEDCTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGLARMFMQQESTGNTNRIVGTYGYMSPEYAMGGIFSTKSDVYSFGVLLLEIVSGRRNTSFYDADHPLNLIGHAWELWNQGVPLQLMDPSLNDSFDPDEVKRCIHVGLLCVEQYANDRPTMSNIISMFKNESALVTLPRRPAFYVERENFDGKTSSNELCVDYIDEITASSEI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02427 792 FunFam Uncharacterized protein 450 550 - -
Pumo10g02427 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 30 162 - -
Pumo10g02427 792 SMART blect_4 43 165 IPR001480 -
Pumo10g02427 792 Pfam D-mannose binding lectin 87 190 IPR001480 -
Pumo10g02427 792 SMART serkin_6 475 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02427 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 195 IPR036426 -
Pumo10g02427 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 755 - -
Pumo10g02427 792 Gene3D Phosphorylase Kinase; domain 1 446 550 - -
Pumo10g02427 792 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 138 770 - -
Pumo10g02427 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Pumo10g02427 792 Gene3D - 31 163 IPR036426 -
Pumo10g02427 792 SUPERFAMILY Protein kinase-like (PK-like) 459 771 IPR011009 -
Pumo10g02427 792 ProSiteProfiles Protein kinase domain profile. 475 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02427 792 CDD STKc_IRAK 481 749 - -
Pumo10g02427 792 ProSiteProfiles Bulb-type lectin domain profile. 37 158 IPR001480 -
Pumo10g02427 792 PIRSF SRK 13 282 IPR024171 GO:0004674
Pumo10g02427 792 PIRSF SRK 273 791 IPR024171 GO:0004674
Pumo10g02427 792 Pfam PAN-like domain 328 365 IPR003609 -
Pumo10g02427 792 Gene3D Transferase(Phosphotransferase) domain 1 551 755 - -
Pumo10g02427 792 Pfam Protein tyrosine and serine/threonine kinase 478 745 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02427 Pumo-Chr10 37760402 37765015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02427 403 763 Receptor kinase-like Gene Family AT3G45860 50.138 1.56e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02427 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02427 - - gmx:100820258 1142.1