Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02415 ATGACGGCTACAAATGGGTTTTCATCTGAAAATAAGTTGGGACAGGGAGGCTTTGGACCTGTTTATAAGGGAATTCTGCCAACAGGACAAGAGGTTGCTGTAAAAAGACTTTCAAAAACTTCTGCACAAGGAATTGTGGAGTTTAAAAATGAACTAACACTTATATGTGAACTTCAGCACATGAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGACGAGAAGATTCTAATTTACGAGTATATGCCTAACAAAAGCTTGGATTTTTATCTGTTCGATTCTACTAGAAGCAAATTACTAGATTGGAAGAAGCGCTTCAACATAATAGAAGGAATTTCTCAAGGAATACTCTATCTTCACAAGTACTCAAGACTCAAAGTCATTCATAGAGACTTAAAAGCCAGTAACATTCTTCTTAACGAAAATATGAACCCAAAAATTTCAGATTTTGGATTGGCAAGAATGTTCACGCAACAAGATTCCGTATCAAATACCAACAGGGTTGTTGGGACATATGGTTACATGTCTCCAGAATATGCCATGGAAGGAGTTTTCTCTACAAAATCTGATGTCTACAGCTTTGGAGTGTTGCTGCTTGAAATTGTTAGTGGAAGAAGAAACACTAGCTTTTATGATGCTGATCGAGTCGATCGACTATTAAATCTAATAGGATATGCATGGGAGTTATGGAAAGATGGTGTATGTCTGCAGTTAGTGGATCCATCACTAAATGAGTCGTTTGACCCTGATTTAGTGCAAAGATGCATTCATGTTGGTCTCTTGTGCGTGGAACATTATGCTAAATGA 810 0.3728 MTATNGFSSENKLGQGGFGPVYKGILPTGQEVAVKRLSKTSAQGIVEFKNELTLICELQHMNLVQLLGCCIHEDEKILIYEYMPNKSLDFYLFDSTRSKLLDWKKRFNIIEGISQGILYLHKYSRLKVIHRDLKASNILLNENMNPKISDFGLARMFTQQDSVSNTNRVVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIVSGRRNTSFYDADRVDRLLNLIGYAWELWKDGVCLQLVDPSLNESFDPDLVQRCIHVGLLCVEHYAK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02415 269 SUPERFAMILY Protein kinase-like (PK-like) 3 265 IPR011009 -
Pumo10g02415 269 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 1 82 - -
Pumo10g02415 269 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 83 269 - -
Pumo10g02415 269 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 266 - -
Pumo10g02415 269 SMART serkin_6 7 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02415 269 ProSiteProfiles Protein kinase domain profile. 7 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02415 269 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Pumo10g02415 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pumo10g02415 269 Pfam Protein tyrosine and serine/threonine kinase 10 208 IPR001245 GO:0004672|GO:0006468
Pumo10g02415 269 Gene3D Transferase(Phosphotransferase) domain 1 83 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02415 Pumo-Chr10 37010413 37011769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02415 3 266 Receptor kinase-like Gene Family AT4G11530 60.985 3.07e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02415 PK_Tyr_Ser-Thr 6.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02415 - - vun:114169229 474.937