Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02408 ATGAAGAAGATCAATCTATTGCTCAGAAAATGCAAGAGTTTGTCAAGGCAGCTAGGAAGATCTTCATCATATAGCAGCCTGAGGTCCAAATCCACTAAGGAAGACATATGGGGTGGACATGGCATGCAAGAAGATGAACATTGTGAAACTATATTTGTTGGCAGCACAAGGAAAAGGTATGTGATCAGCAAAAAGTATCTGAACCATCCTCTTCTGAATGCACTAATCAACAAGTCAAAGCAAAAGGACAGTGATGAAGATAGTAGTGTGTTGGTGGTCAACTGTGAGGTGGTTCTCTTTGATCATCTATTGTGGATGCTAGAAAATGCAGATCCCAAGTTTAGTTCTGAGTCTTTGGAGGAATTGGCTGAACTCTATGTGTTTTGA 387 0.4031 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGHGMQEDEHCETIFVGSTRKRYVISKKYLNHPLLNALINKSKQKDSDEDSSVLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02408 128 Pfam Auxin responsive protein 31 107 IPR003676 GO:0009733
Pumo10g02408 128 PANTHER EXPRESSED PROTEIN 7 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02408 Pumo-Chr10 36694402 36694788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02408 50 109 Calmodulin-binding Proteins AT5G20810 33.333 1.26e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02408 - - gmx:100500162 207.608