Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo10g02402 | ATGAAGGAGGGTGGTAGAAAACACGGTGCAATGTCGCCATGTGCGGCATGCAAGCTTCTTCGAAGGAGATGCGCACAGGATTGTGTGTTTGCTCCTTATTTCCCTGCAGATGAGCCCCATAAGTTTGCCAGTGTGCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAATTACCAGAGCACCAACGAAGTGATGCGGTTAGTTCAATGGTATATGAAGCCAATGCAAGGGTAAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTGCAGCAACAAGTTGATGTTTTACAAACCCAGTTGGCACTGGCACAAGCAGAGGTTGTGCACATGAGAATGCGCCAAGTGTCATCAACTTCCTCTGATGATGAACACAGACCAGTGCCTGCAGCCTCCAATATTTCATCCTCAGAGAACTTATCTCCATCAAGTAGACTCACCACGTCCCTTTTTGCTATGGACATGGGAGAGTCCTTGTGGTCATGTTAA | 504 | 0.4762 | MKEGGRKHGAMSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQVSSTSSDDEHRPVPAASNISSSENLSPSSRLTTSLFAMDMGESLWSC | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo10g02402 | 167 | Coils | Coil | 92 | 112 | - | - | |
Pumo10g02402 | 167 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 11 | 134 | - | - | |
Pumo10g02402 | 167 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 110 | IPR004883 | - | |
Pumo10g02402 | 167 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
Pumo10g02402 | 167 | MobiDBLite | consensus disorder prediction | 119 | 148 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo10g02402 | Pumo-Chr10 | 36302810 | 36307621 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo10g02402 | 1 | 167 | AS2 family | AT1G31320 | 69.540 | 1.44e-71 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Pumo10g02402 | LOB | 1.2e-43 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo10g02402 | - | - | ccaj:109811748 | 244.588 |