Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02392 ATGAAGGTCAATAAGATCTCCAAGCATCCTTATAAGCTCATTTTCATGAGGGGAACAATTGTGAAGCAAATTGATCTTCCAGAAATCTCACAGTATCTATATAATTTCTGTCAATTTGAAGACATATTGAGTGGAGCTGTATGTACTGATGTGTTAGTTGGTAAACTCAAAACTTATATTCAATGTGAAGTATATTTTAGCTTTTATGAGAAACATCAATCCGGTGCTATTATTGTATTGCTCACATTGGCAAAGATAAAGGACTCAAAAGGTAAATATCCAACAACCATACAAAATTCAATGCATGGTTCAAAGTTGTTGATCAATGAAAATGTGCCAGAGACTCAAAAGTTTAAGGACAGCTTGCACACAATTGGTGCTCAAGAATCATATAGTCAAATAATGACTCAATTTACTTCAATCTCTCAAGTTTCATCGGAAGACAAATTTTTGGGGAATTTTTTAGTTAAGAGCATAGCCGAAATCAATCAACTGAGTGGGGACTGTTATTGTGCTACAGTGGGAAGAATTGAGAAAGTCTTTGCTGGAAATGGTTGGAGTTATGAAGCATGCTCCAAGTGCAACAAAAAAAGTGATACATCAGATATTCCTGCAAGTTGTGGCCAACATAACTCAAAGATAGTTTCAAGGTTCAGAATACAGATTAATGTTTCACACAAAGAAGGAACTTCAAAGTTCATATTATGGGATCGAGAGTACATTCAATTGCTAAATCAAACTGCTGATCAGTTGAAAAAACAATTGAAAGATGAAGGGGAATTGAATCCATATTCTGTTCCAGAAGCTATTGACAATCTTCTTAGAAAGACTTTGGCTTTTAAGATAAGGGCTCAACCAAGTCGTTCTTCTGTCATTCAAGTATCTGAGGATGCAAAGATAATTGAGTCCATATTGCAGAAAATTCCAAATCATGAGGATGTTGTGTCAACTGAGAAAGTGAAGTTAGAACATTCTTTGTTGAAGCAAGATGAGTCATATGACAGTCAAACTTTGTCCGCAACATCTGATTATGATCCTGATTTAGTAGGAATGTCAACTCCTGCTAAGAGAGTTAGTTCTGACATACAAGTTGATGATCTTGCTTTTCAAGATCTAACTTCAGGTCAACTTTCTTCTACAAAACCTACAAAGCAAATCAAAATTGAATGA 1170 0.3504 MKVNKISKHPYKLIFMRGTIVKQIDLPEISQYLYNFCQFEDILSGAVCTDVLVGKLKTYIQCEVYFSFYEKHQSGAIIVLLTLAKIKDSKGKYPTTIQNSMHGSKLLINENVPETQKFKDSLHTIGAQESYSQIMTQFTSISQVSSEDKFLGNFLVKSIAEINQLSGDCYCATVGRIEKVFAGNGWSYEACSKCNKKSDTSDIPASCGQHNSKIVSRFRIQINVSHKEGTSKFILWDREYIQLLNQTADQLKKQLKDEGELNPYSVPEAIDNLLRKTLAFKIRAQPSRSSVIQVSEDAKIIESILQKIPNHEDVVSTEKVKLEHSLLKQDESYDSQTLSATSDYDPDLVGMSTPAKRVSSDIQVDDLAFQDLTSGQLSSTKPTKQIKIE 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02392 389 Gene3D - 132 309 IPR012340 -
Pumo10g02392 389 Pfam Domain of unknown function DUF223 5 52 IPR003871 -
Pumo10g02392 389 Gene3D - 60 131 IPR012340 -
Pumo10g02392 389 Coils Coil 241 261 - -
Pumo10g02392 389 SUPERFAMILY Nucleic acid-binding proteins 157 286 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02392 Pumo-Chr10 35449979 35452058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02392 104 264 Core DNA Replication Machinery Family AT5G08020 24.551 4.98e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02392 - - gmx:102667313 280.411