Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02389 ATGGGCACTGATGCAGTGGGAAGCGAAGGGTACTCTCTGCTGAAGGATTTAAGACTGGAAATTGAAGTGAAGGAGGGAACTTTCTCTCTCTGCTTTTGGCTTTATTTGACGAGTTCCACTACATTCCCCATTACCATCATTCAACAGGTTTTCTCTGATATCTCCGAAAGTGCTCCTTTTCTTGTTATTGATGATAATAAGAGAATCCATATGTTACCAGTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATAAATTCCTGGGCAGAAGTTCCACATGCAACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTTGGGTGTGAGGTTTGTCCAGATCATATCCAGCTTCGGATTAATGGAGAGATTGTAGGAGAAAAGTCTTTGTGTTCCTTATTAAATAAGGAATCCAGTTCAAGTGATTTGAAGAAGTTAACTTTGGCAAATGTTGGTGGAGATGGAAATAGTGTGCAGGGTTATGTGCACAATTTTGAAATATTTCCTATTATTTCTTCTATTAAAGATTGCCATTTAAAGGACCCTCCTCTGAAGTTATCAATTGATGAATCATCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGGGCATTGTTGGTGGCAAGGCATCTTGCCGTAGGAACTTTTCTTTGGATGTTGTTCTATCAGATGCTTTTGGACAGCCTGTTGATAAGGAGAATGAGGTTTTTGCCTCACTTTTGTATGCTGACATGGGGGCACTAGTGGAGAATACAACTGAAGATGAAGCACCCCTATTGGCTAGTTATGATGGAATAGAATTTTCTTCTTGTGAAAGACCAAGTAAGCTTTTGCTGGGACGTGCTTCATTTAAGCTCAAAATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTTCCAAGACTAGGAAATTATCCTTTTCTTGAGACATATTCCCGTCCAATTCGATGCATCTCCAGAAGCCGTAACACAAGATTGTCCACTCTGGTGTGGAAAAGGTCAACTGCTCTTAATTGCCTTAGTTTGTCTCAATCTTCAGCTATGGATGATGGGTCCTTGGAACTTCAGCATTCTGGTCATGAAGCACAAGCCAATCAACTGATGAAGCGGTTTAGACTTGGTCAAGACAAGATATCTGTATCAGTGAAGGCTGACCCCACCTTAGAGCAACCTGATGAAGAATGTAATTCTCATGTCCGGACTGCTAACCAGATTGAGAATGGGTTTCCAACAAGCTTGGATGGAAGGCCTGCAAACTTCAATGAAGCAGATGATTCTCCATCTGATTCAGAGAGTATAGGGGAGAGGAATTCACCTTTAGATAGTATGGCAAGTAGAAGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTTGCAAGCTTGGCTGAGAGATCTCTCATGCTTAAGGAAATTGCTACCTCTGCTTCTGACAAAGAAATTTCAGAATTGGCTCATCACGTGTCACTCTATTCAGGATGTTCACACCATGGAAACCAAATATTATTGGCCAAGAGATTGATAGAAGATGGAACTAATCTTTGGAAGGTGATGTCTCCAAACAATCACCACATTCCTTGGGAGAGTGCAGTGTATGAGATTGAAGAGCAATTCATGAAGATTGCTTCTTGTTATTCAAGATCTCTCTCACCTCAGGACCTAAATCTTCTGAGATGGATTGCTGGATGTCAAGAGTACCTAACACAAGAGAACTTTGAGAAGTTGTGGTGTTGGTTGTACCCTGTGGCATTTATAATATCAAGGGACTGGATAAAACCTATCTGGAATTCCACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCACTTCAAGGTCCCACTGGATTTCAAGAACCTGGTACCTTTATACTCCGATTTCCTACCTCACGAAGCTGGCCACACCCAGATGCCGGTAGCCTAGTTGTAACCTATGTCGGCAATGACTACAAACTTCACCACAGGCTACTTTCTATGCATCATGTTTATGGTTCTTATAGCTCTGGTGATAAAAGAGTTGATGTGAAACCGCTGCAAGATATGCTATTGGCAGAACCTGAGCTGTCTCGATTGGGAAGGATAATAAGAAGCCATTAG 2148 0.4115 MGTDAVGSEGYSLLKDLRLEIEVKEGTFSLCFWLYLTSSTTFPITIIQQVFSDISESAPFLVIDDNKRIHMLPVLLLHEEAPDTGNINSWAEVPHATVDFEFPLEKWVHVGCEVCPDHIQLRINGEIVGEKSLCSLLNKESSSSDLKKLTLANVGGDGNSVQGYVHNFEIFPIISSIKDCHLKDPPLKLSIDESSASEIEEESDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVDKENEVFASLLYADMGALVENTTEDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRLFLIRFCVPRLGNYPFLETYSRPIRCISRSRNTRLSTLVWKRSTALNCLSLSQSSAMDDGSLELQHSGHEAQANQLMKRFRLGQDKISVSVKADPTLEQPDEECNSHVRTANQIENGFPTSLDGRPANFNEADDSPSDSESIGERNSPLDSMASRRYPISDMTIFKYCLASLAERSLMLKEIATSASDKEISELAHHVSLYSGCSHHGNQILLAKRLIEDGTNLWKVMSPNNHHIPWESAVYEIEEQFMKIASCYSRSLSPQDLNLLRWIAGCQEYLTQENFEKLWCWLYPVAFIISRDWIKPIWNSTSPKWIEGFITKEEAEASLQGPTGFQEPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSMHHVYGSYSSGDKRVDVKPLQDMLLAEPELSRLGRIIRSH 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02389 715 MobiDBLite consensus disorder prediction 417 454 - -
Pumo10g02389 715 SUPERFAMILY SH2 domain 608 697 IPR036860 -
Pumo10g02389 715 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 173 IPR013320 -
Pumo10g02389 715 Gene3D SH2 domain 600 710 IPR036860 -
Pumo10g02389 715 MobiDBLite consensus disorder prediction 434 450 - -
Pumo10g02389 715 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 25 706 IPR001217 GO:0003700|GO:0006355|GO:0007165
Pumo10g02389 715 ProSiteProfiles Src homology 2 (SH2) domain profile. 614 715 IPR000980 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Pumo10g02389 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02389 - - gmx:100803169 1325.46