LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g02381	ATGAACAGCAATAGCAATATGAGCCACCACAATCCCAATCCCACAAGAACAAAGAAAGAAGTTGTTGAAGACCAGGAATCACAGTTAACGTTGCCACTGCTGAGAAGCAAAGAGAGAGATGAGGAAGGTTCAGGGTCCAAATCAAAGTCAAAGGCATCGGTTACTGGCTCCGTGTTCAATTTGTCAACTACGATCATCGGCGCCGGAATCATGGCCTTACCTGCGGCCATCAAGGTGGTGGGTGTGGCCACCGGCGTCGCCGCCATCGTTCTCCTCGCCTTCCTCACACACACCTCTCTGGAGATTCTCCTCAGATTCAGCAGAGTTGCCAAGGCTTCCACCTACGCCAATCTAATGGGTGATGCCTTTGGTACCCCTGGAACCTTGCTGTTTCACGTGTCTGTGCTCATCAACAACTTTGGGATACTTGTCGTCTACGTTATCATAATTGGTGATGTCTTGTCCGGAACATCATCTTCCAGTGGAGTTCATCATTTTGGGGTGCTTGAAGGCTGGTTTGGTCAGTGCTGGTGGACTGCCCGCACTTTTGTTCTGCTTCTCACAACCCTCTTCGTGTTTGCTCCATTGGGGTTCTTTAAGAGGATAGATTCATTGAGACATACTTCTGCCCTAGCAGTGGCTCTGGCTATTGTGTTTCTACTCATAACTGCAGGAATTACATTCGTCAAATTGTTTAATGGCAGTATAGCTAGTCCGAGGTTGCTTCCAAATATTACTGATGTTACATCCATATGGAATCTCTTTACAGCAGTTCCAGTTCTTGTGACAGCATTTGTTTGTCACTACAATGTGCATACAATAGACAATGAGTTAGGAGACCCTTCCCTGATGCAACCAGTTATACGTGCTTCGCTGGTTCTGTGCTCTAGCATTTATATTCTTACAGCATTATTTGGATTTCTCCTATTTGGTGAGTCAACACTTGATGATGTGCTGGCCAACTTTGATACTGATCTGGGCATCCCTTATAGCAGTCTACTCAATGACATTGTTCGTATCAGCTATGCCCTCCACCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCACTGCGCTTCAATTTGGACGATCTTATCTTTCCTTCATCTAGGTCCTTGGATTTGGACAAGTGTAGGTTTGCCTTGATCACCACTGGACTCATTACTTTAATCTATGTAGCTGCAAATTTTGTACCTAGCATCTGGGATGCATTTCAATTCACTGGAGCAACTGCCACGGTTTGCCTTGGGTTTATTTTCCCTGCTGCAATTGCTCTTAGGGATCCACATAGCATTGCAACAAAGAAGGACAAGATTTTATCCATTGTGATGATTTTTCTGGCTGTGTTCTCAAATGTTGTGGCTATATACAGTAATGCTGATGCCTTGTTCAGAAAACATGGGGATCCTCGCCAACGAGTTACGTGCATTAACAGAGAGATGTGTGCTCCCAATTCATTAAATTAA	1464	0.4474	MNSNSNMSHHNPNPTRTKKEVVEDQESQLTLPLLRSKERDEEGSGSKSKSKASVTGSVFNLSTTIIGAGIMALPAAIKVVGVATGVAAIVLLAFLTHTSLEILLRFSRVAKASTYANLMGDAFGTPGTLLFHVSVLINNFGILVVYVIIIGDVLSGTSSSSGVHHFGVLEGWFGQCWWTARTFVLLLTTLFVFAPLGFFKRIDSLRHTSALAVALAIVFLLITAGITFVKLFNGSIASPRLLPNITDVTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDPSLMQPVIRASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSSRSLDLDKCRFALITTGLITLIYVAANFVPSIWDAFQFTGATATVCLGFIFPAAIALRDPHSIATKKDKILSIVMIFLAVFSNVVAIYSNADALFRKHGDPRQRVTCINREMCAPNSLN	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g02381	487	MobiDBLite	consensus disorder prediction	1	52	-	-
	Pumo10g02381	487	Pfam	Transmembrane amino acid transporter protein	51	458	IPR013057	-
	Pumo10g02381	487	MobiDBLite	consensus disorder prediction	33	47	-	-
	Pumo10g02381	487	PANTHER	AMINO ACID TRANSPORTER	43	450	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo10g02381	Pumo-Chr10	34958398	34963270	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo10g02381	12	471	Amino Acid or Auxin Permease AAAP Family	AT3G30390	61.304	0.0	580

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g02381	K14207		-	gmx:100778699	786.563