Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02368 ATGGATGGGAACAAGGACGACGCGTTGAAGTGTTTGAGAATCGGCAAAGAGGCGTTAGAAAACGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGCATCGCCTCGACCCCACTCTCCCCGTCGACGATCTATTGTCCACGATAGAGGCTGATGCAGGGGATCAGGCCCCCGCCGCCGAGGCGGCGGGGCCCACAAAGCTCCCGGATCAGCCTTCTATCCGCCGGAGGGCAGCCGCGGCCGAGGCTGCCCCGGCGGGGTCTTCGTCCTCGTCGGCCTCATACACCGAAGAGCAAGTTTCAATTATCAGAGAGATTAAGAGAAAGAAAAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTGTGGAGGATGTGAGGAAATCATATAGGAAACTGTCTCTAAAGGTTCATCCTGATAAGAACAAGGCCCCTGGCGCCGAGGAAGCGTTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTGGTAATGAAGAGAGCAGGAGGAAGTATGATGTTTCGGGTGAGGATGAAGCCGTTTACGAGCAGCGGGCGGCGAGGCCGGCTGCGAGGGGTTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTTAGGAACTTCTTCTTCGGAGGAATGGCCCCTGCAACCAATTTTAGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGTTTCAATGGTCATAGGCCTGCTGAACATGGTTCTGGTGGATTTAATGTTCGTGCTTTAATTCAGTTGCTGCCTGTGCTGCTTATTTTGCTTATAAACTTTTTGCCTTCTTCGGAACCCTTGTATTCGCTTTCGAAGAGTTATCCTTATGAACATCGGTTTACCACATCCAAGGGTGTTAACTATTATGTCAAGTCTACGCAGTTTGCTCAGGAGTATCCGCCGGGGAGCGAGGAACGAGCGACGATGGAAGATCGGGTGGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCATTTCGAGTTGCAGCGTCGCCAGTGGGGCTATATCCGGGAAACGCCCCACTGCGATATGTTGCGGAAGTTTGAGGTGGTGAATTGA 1083 0.5143 MDGNKDDALKCLRIGKEALENGDRSRALKFVTKAHRLDPTLPVDDLLSTIEADAGDQAPAAEAAGPTKLPDQPSIRRRAAAAEAAPAGSSSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLGNEESRRKYDVSGEDEAVYEQRAARPAARGYNGYYEADIDAEEIFRNFFFGGMAPATNFRGFSFGPAGFNGFNGHRPAEHGSGGFNVRALIQLLPVLLILLINFLPSSEPLYSLSKSYPYEHRFTTSKGVNYYVKSTQFAQEYPPGSEERATMEDRVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02368 360 Gene3D DnaJ domain 108 223 IPR036869 -
Pumo10g02368 360 PANTHER AT29763P-RELATED 1 355 - -
Pumo10g02368 360 FunFam Chaperone protein dnaJ 49 108 224 - -
Pumo10g02368 360 CDD DnaJ 112 165 IPR001623 -
Pumo10g02368 360 MobiDBLite consensus disorder prediction 57 96 - -
Pumo10g02368 360 PRINTS DnaJ domain signature 132 147 IPR001623 -
Pumo10g02368 360 PRINTS DnaJ domain signature 148 168 IPR001623 -
Pumo10g02368 360 PRINTS DnaJ domain signature 114 132 IPR001623 -
Pumo10g02368 360 Pfam Domain of unknown function (DUF1977) 269 340 IPR015399 -
Pumo10g02368 360 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Pumo10g02368 360 ProSiteProfiles dnaJ domain profile. 112 176 IPR001623 -
Pumo10g02368 360 Pfam DnaJ domain 112 173 IPR001623 -
Pumo10g02368 360 SUPERFAMILY Chaperone J-domain 77 172 IPR036869 -
Pumo10g02368 360 SMART dnaj_3 111 168 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02368 Pumo-Chr10 34827996 34829437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02368 107 173 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 9.85e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02368 K09518 - gmx:100793797 602.438