Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02367 ATGGATGGGAACAAGAAGGACGCGTTGAAGTGTTTGAGAATCGGCAAAGAGGCGTTAGAAAACGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGCATCGCCTCGACCCCACTCTCCCCGTCGACGATCTATTGTCCACGATAGAGGCTGATGCAGGGGATCAGGCTGAGGCGGCGGGGCCCACAAAGCTCCCGGATCAGCCTTCTATCCGCCGGAGGGCAGCCGCGGCCGAGGCTGCCCCGGCGGGGTCTTCGTCCTCTTCGGCCTCATACACCGAAGAGCAAGTTTCAATTATCAGAGAGATTAAGAGAAAGAAAAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTGTGGAGGATGTGAGGAAATCATATAGGAAACTGTCTCTAAAGGTCCATCCTGATAAGAACAAGGCCCCTGGCGCCGAGGAAGCGTTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTGGTAATGAAGAGAGCAGGAGGAAGTATGATGTTTCGGGTGAGGATGAAGCCGTTTATGAGCAGCGGGCGGCGAGGCCGGCTGCGAGGGGTTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTTAGGAACTTCTTCTTCGGAGGAATGGCCCCTGCAACCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGTTTCAATGGTCATAGGCCTGCTGAACATGGTTCTGGTGGATTTAATGTTCGTTCTTTAATTCAGTTGCTGCCTGTGCTGCTTATTTTGCTTATAAACTTTTTGCCTTCTTCGGAACCCTTGTATTCGCTTTCGAAGAGTTATCCTTATGAACATCGGTTTACCACATCCAAGGGTGTTAACTATTATGTCAAGTCTACGCAGTTTGCTCAGGAGTATCCGCTGGGGAGCGAGGAACGAGTGACGATTGAAGATCGGGTGGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCGTTCCGAGTTGCAGCGTCGCCAGTGGGGCTATATGCGCCAGTGGGGCTATATCCGGGAAACGCCCCACTGCGATATGTTGCGGAATTTTGAGTTTGTGAATTGA 1092 0.5055 MDGNKKDALKCLRIGKEALENGDRSRALKFVTKAHRLDPTLPVDDLLSTIEADAGDQAEAAGPTKLPDQPSIRRRAAAAEAAPAGSSSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLGNEESRRKYDVSGEDEAVYEQRAARPAARGYNGYYEADIDAEEIFRNFFFGGMAPATNFGGFSFGPAGFNGFNGHRPAEHGSGGFNVRSLIQLLPVLLILLINFLPSSEPLYSLSKSYPYEHRFTTSKGVNYYVKSTQFAQEYPLGSEERVTIEDRVEREYFSILRQNCRSELQRRQWGYMRQWGYIRETPHCDMLRNFEFVN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02367 363 CDD DnaJ 109 162 IPR001623 -
Pumo10g02367 363 SUPERFAMILY Chaperone J-domain 79 169 IPR036869 -
Pumo10g02367 363 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Pumo10g02367 363 PRINTS DnaJ domain signature 111 129 IPR001623 -
Pumo10g02367 363 PRINTS DnaJ domain signature 145 165 IPR001623 -
Pumo10g02367 363 PRINTS DnaJ domain signature 129 144 IPR001623 -
Pumo10g02367 363 SMART dnaj_3 108 165 IPR001623 -
Pumo10g02367 363 Pfam DnaJ domain 109 170 IPR001623 -
Pumo10g02367 363 Pfam Domain of unknown function (DUF1977) 266 338 IPR015399 -
Pumo10g02367 363 PANTHER AT29763P-RELATED 1 358 - -
Pumo10g02367 363 ProSiteProfiles dnaJ domain profile. 109 173 IPR001623 -
Pumo10g02367 363 MobiDBLite consensus disorder prediction 55 93 - -
Pumo10g02367 363 FunFam Chaperone protein dnaJ 49 105 220 - -
Pumo10g02367 363 Gene3D DnaJ domain 105 219 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02367 Pumo-Chr10 34806909 34810500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02367 104 170 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 1.16e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02367 K09518 - gmx:100788812 585.874