Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02366 ATGGATGGGAACAAGAAGGACGCGTTGAAGTGTTTGAGAATCGGCAAAGAGGCGTTAGAAAACGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGCATCGCCTCGACCCCACTCTCCCCGTCGACGATCTATTGTCCACGATAGAGGCTGATGCAGGGGATCAGGCTGAGGCGGCGGGGCCCACAAAGCTCCCGGATCAGCCTTCTATCCGCCGGAGGGCAGCCGCGGCCGAGGCTGCTCCGGCGGGGTCTTCGTCCTCTTCGGCCTCATACACCGAAGAGCAAGTTTCAATTATCAGAGAGATTAAGAGAAAGAAAAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTGTGGAGGATGTGAGGAAATCATATAGGAAACTGTCTCTAAAGGTCCATCCTGATAAGAACAAGGCCCCTGGCGCCGAGGAAGCGTTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTGGTAATGAAGAGAGCAGGAGGAAGTATGATGTTTCGGGTGAGGATGAAGCCGTTTATGAGCAGCGGGCGGCGAGGCCGGCTGCGAGGGGTTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTTAGGAACTTCTTCTTCGGAGGAATGGCCCCTGCAACCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGTTTCAATGGTTTCAATGGTCATAGGCCTGCTGAACATGGTTCTGGTGGATTTAATGTTCGTTCTTTAATTCAGTTGCTGCCTGTGCTGCTTATTTTGCTTATAAACTTTTTGCCTTCTTCGGAACCCTTGTATTCGCTTTCGAAGAGTTATCCTTATGAACATCGGTTTACCACATCCAAGGGTGTTAACTATTATGTCAAGTCTACGCAGTTTGCTCAGGAGTATCCGCTGGGGAGCGAGGAACGAGTGACGATTGAAGATCGGGTGGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCGTTCCGAGTTGCAGCGTCGCCAGTGGGGCTATATGCGCCAGTGGGGCTATATCCGGGAAACGCCCCACTGCGATATGTTGCGGAATTTTGAGTTTGTGAATTGA 1101 0.5032 MDGNKKDALKCLRIGKEALENGDRSRALKFVTKAHRLDPTLPVDDLLSTIEADAGDQAEAAGPTKLPDQPSIRRRAAAAEAAPAGSSSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLGNEESRRKYDVSGEDEAVYEQRAARPAARGYNGYYEADIDAEEIFRNFFFGGMAPATNFGGFSFGPAGFNGFNGFNGHRPAEHGSGGFNVRSLIQLLPVLLILLINFLPSSEPLYSLSKSYPYEHRFTTSKGVNYYVKSTQFAQEYPLGSEERVTIEDRVEREYFSILRQNCRSELQRRQWGYMRQWGYIRETPHCDMLRNFEFVN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02366 366 CDD DnaJ 109 162 IPR001623 -
Pumo10g02366 366 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Pumo10g02366 366 SMART dnaj_3 108 165 IPR001623 -
Pumo10g02366 366 Gene3D DnaJ domain 105 219 IPR036869 -
Pumo10g02366 366 SUPERFAMILY Chaperone J-domain 105 224 IPR036869 -
Pumo10g02366 366 PANTHER AT29763P-RELATED 1 361 - -
Pumo10g02366 366 Pfam Domain of unknown function (DUF1977) 269 341 IPR015399 -
Pumo10g02366 366 PRINTS DnaJ domain signature 145 165 IPR001623 -
Pumo10g02366 366 PRINTS DnaJ domain signature 111 129 IPR001623 -
Pumo10g02366 366 PRINTS DnaJ domain signature 129 144 IPR001623 -
Pumo10g02366 366 ProSiteProfiles dnaJ domain profile. 109 173 IPR001623 -
Pumo10g02366 366 MobiDBLite consensus disorder prediction 55 93 - -
Pumo10g02366 366 FunFam Chaperone protein dnaJ 49 105 220 - -
Pumo10g02366 366 Pfam DnaJ domain 109 170 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02366 Pumo-Chr10 34786466 34790063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02366 104 170 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 1.08e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02366 K09518 - gmx:100788812 557.755