Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02360 ATGTCCACGACCAGGGACGAATCCTCGGACAACGACAGCACCTGCTCCTCCCTCACCCTCGCCGACTCCACCCGCAGCTGGCTCAGCTCCTTCAGCTTCCGCCGCCGCAGCAGCTCCCTCTCCCACCACACCACCACCACCACCACCACCAACGCTGCATGGGAGGCCATGCGTCGGCTCCGCCTCGACACCGCCGACATCAGCCTCGACCACTTCCGGCTCCTGCGGCGGCTTGGCAGCGGCGACATCGGGAACGTCTACCTCTGCCAGATACAAAACCCCGTGGCGGCGCCGCCGCAGTGCCTCTACGCCATGAAGGTGGTGGACAGAGAGGCGCTGGCCATAAGGAACAAGCTGCACAGGGCGGAGATGGAGAAGGAGATTCTGGCAATGATGGATCACCCCTTCTTGCCCACCCTATACGCCGCGTTTGATGCCTCTCATTACTCTTGCCTCGTCATGGACTTCTGCCCCGGTGGTGACTTGTTCTCCGCCCGCCAACGCCAGCCAGGGAAACGCTTCACCATCTCATCCGCCAAGTTTTATGCAGCTGAGACACTAGTGGCGCTGGAGTATCTCCACATGAAGGGCATAGTGTACAGGGATTTGAAGCCAGAGAACGTGCTGGTAAGGGAGGACGGACACATTATGCTTTCAGATTTCGATCTGTGCCTCAAATGCGACGTCGTTCCCAAGCTGCTGAGGAGCAAAACCAAATCAGAAAGAAGCAGTGTCAAGACTCGAAGGAGTAGTTCAGCACCATCTTGTGCTGCTGCTCCATTACAATCCTGTTTCTCTGCCTCAAGCAAGAGAAAGAAAGTGACAACAACTATAAGGGAAAATGTGGAAGTGTGTGAGCATGAGACAGAGATGGTGGCAGAGCCCATCAATGCAAGGTCCAAGTCCTTTGTGGGAACGCATGAGTACCTGGCACCTGAAGTGATTTCAGGGCAGGGGCATGGGAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGCTGTATGGGAGAACGCCCTTCAAGGGCGAGAACAATGACAAGACCCTCATTAACATCCTCAAGCGGCCCCTGGCTTTTCCGAGAATTTCAGTGAGTAGCAGCAAGGAGATTGAGGAGATGGTGAAGGTTCAGGACCTCATCAGCAAGCTCCTGGTGAAGAACCCAAAGAAGAGAATTGGGTGCTGCATGGGCTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAGGGGGTGAATTGGGCTCTGATTAGATCAGTTAGGCCCCCTGAGGTCCCTGCTGATATGAACAAGATTAGGAGTAGAGTTTTGTTACAGAAACTAAGCAAGAAAGACAAGGATCAACCATATCAGATTACTCATCATTTTGATTACTTTTAA 1383 0.5365 MSTTRDESSDNDSTCSSLTLADSTRSWLSSFSFRRRSSSLSHHTTTTTTTNAAWEAMRRLRLDTADISLDHFRLLRRLGSGDIGNVYLCQIQNPVAAPPQCLYAMKVVDREALAIRNKLHRAEMEKEILAMMDHPFLPTLYAAFDASHYSCLVMDFCPGGDLFSARQRQPGKRFTISSAKFYAAETLVALEYLHMKGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLLRSKTKSERSSVKTRRSSSAPSCAAAPLQSCFSASSKRKKVTTTIRENVEVCEHETEMVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNDKTLINILKRPLAFPRISVSSSKEIEEMVKVQDLISKLLVKNPKKRIGCCMGSVEIKRHEFFKGVNWALIRSVRPPEVPADMNKIRSRVLLQKLSKKDKDQPYQITHHFDYF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02360 460 FunFam serine/threonine-protein kinase D6PK-like 298 428 - -
Pumo10g02360 460 SMART serkin_6 72 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02360 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pumo10g02360 460 ProSiteProfiles Protein kinase domain profile. 72 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02360 460 Gene3D Transferase(Phosphotransferase) domain 1 157 226 - -
Pumo10g02360 460 PANTHER FLIPPASE KINASE 1-RELATED 20 431 - -
Pumo10g02360 460 CDD STKc_phototropin_like 70 428 - -
Pumo10g02360 460 FunFam Serine/threonine-protein kinase WAG2 161 227 - -
Pumo10g02360 460 Pfam Protein kinase domain 73 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02360 460 Pfam Protein kinase domain 300 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02360 460 Gene3D Phosphorylase Kinase; domain 1 70 156 - -
Pumo10g02360 460 SUPERFAMILY Protein kinase-like (PK-like) 53 431 IPR011009 -
Pumo10g02360 460 FunFam protein kinase PINOID 2 70 156 - -
Pumo10g02360 460 Gene3D Transferase(Phosphotransferase) domain 1 297 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02360 Pumo-Chr10 34557507 34559863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02360 10 460 AGC Kinase Gene Family AT2G26700 55.684 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo10g02360 Pkinase 6.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02360 K08286 - gmx:100787216 743.806