Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02356 ATGGGAACCTCTGCGAACGCCGTCGCAGGTGGTCGCGGCGCCCCTGTCCCAAAAGACGTTGACTACGCCAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGATCGCGTTCGCATGGACGCTTACTTCAACGCCATTTTTGAAAACAAACGCCACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCGGCGCAAGCAGGTGCGAGGAAAGTGTATGCAGTGGAAGCTACCAATATGTCAGAACACGCACGTGCACTTCGTCAAAGCGAATAA 318 0.5252 MGTSANAVAGGRGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKRHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATNMSEHARALRQSE 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02356 105 Gene3D Vaccinia Virus protein VP39 21 105 IPR029063 -
Pumo10g02356 105 CDD AdoMet_MTases 63 90 - -
Pumo10g02356 105 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 101 IPR029063 -
Pumo10g02356 105 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 20 101 IPR025799 GO:0016274|GO:0018216
Pumo10g02356 105 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 105 IPR025799 GO:0016274|GO:0018216
Pumo10g02356 105 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02356 Pumo-Chr10 34415573 34416387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02356 24 92 C2H2 Transcription Factor Family AT3G12270 47.826 1.03e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02356 K11434 - gmx:100795134 200.29