Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02354 ATGGAAGAGTTTAAGATTCTTTTTGCCTTTCTCATGACTCTGCTAGTTGTGCTCAAGGTCACAATCTCCCTCTGGTGGATACCAAGAAAAATTGAGGGACATTTCTCCAAGCAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGGAATGTCAAAGAACTTGTGGCAATGATGATGAAAGCTTCCTCTCAACCCATCATGCCTTTCTCCCACAACATTCTCCCTAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTACGGTGCAACATTCCTTGTTTGGTTTGGACCCACTGTTCGAGTCACCATTTCTGATCCAGACCTCATCCGGGAAATCTTCACCTCATCCAAGTCAGAATTCTATGAGAAAAACGAATCTCCCCCACTTGTGAAGCAGCTTGAAGGTGATGGACTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACAGAAGAATCATCTCTCCCACCTTTCATATGGAAAATCTCAAACTGTTGATACCGATTATGGCAACAAGCGTGGTTGAGATGTTGGAGAAGTGGAAGGCAATGGCCGAGGAGAAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGAGTTTTCAAACCTTAACAGAAGATGTCATCACTAGGACAGCGTTTGGAAGCAGCCATGAAGATGGCAAAGCCATTTTCCGGTTACAAGCCCAACAAATGGTCCTAGCTGCTGATGCCTTCCAAAAAGTGTTCATTCCAGGTTATAGATTCTTTCCCACGAGGAGGAACATAAATTCTTGGAAATTGGACAAGGAAATCAAGAAATCGTTGGTGAAGCTCATCGATCGAAGAAAAGAGAATGCGTGTGGGAATGAAGAAACGAAAGGGCACAAGGATTTGCTGGGGCTTATGATTCGGGCTTCCAAAAGCACTTCCAATCATGTGAATCATGTAACGGTGGATGACATAGTGGAAGAGTGCAAAACCTTTTTCTTTGCAGGCAAACACACCACTTCGAACCTGCTGACGTGGACCACGATTCTGCTTGCGATGCACCCGCAGTGGCAGGTACGGGCACGTGAGGAGCTCGTGAGCGTGTGCGGGGCACGTGACATCCCCACCAAGGAGGATCTTGCCAAGCTTAAGACACTGAGCATGATCGTGAACGAGTCTCTGAGGCTGTACCCTCCCACAATCGCAACCATAAGAAGGGCGAAAGCCGACGTGGAGCTAGGGCCGTACAAGATCCCGTGCGGGACGGAGCTCCTGATCCCCATCCTGGCCGTGCACCACGATCAGGCCACGTGGGGCAGCGACGCCACCGAGTTCGATCCCGGCCGCTTCTCCAACGGCGTGTCCCGCGCCGCGCACCACCCCTTCGCCTTCATCCCCTTCGGCCTCGGCGCCCGCACTTGCATCGGACAGAACCTCGCGCTTCTCCAAACCAAGCTCGCCCTCGCCCTCATGCTCCACCGTTTCAGTTTCCGCCTGGCGCCAACCTATTGCCACGCGCCAACGGTTCTCATGCTGCTCTACCCTCAGTACGGTGCACCCGTCCTCTTCCAACCAATACCCGCAACGGCAACAACCACTGTGGATTAG 1578 0.5101 MEEFKILFAFLMTLLVVLKVTISLWWIPRKIEGHFSKQGIRGPPYRFFIGNVKELVAMMMKASSQPIMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRVTISDPDLIREIFTSSKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPIMATSVVEMLEKWKAMAEEKKGEVEIEVSESFQTLTEDVITRTAFGSSHEDGKAIFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNINSWKLDKEIKKSLVKLIDRRKENACGNEETKGHKDLLGLMIRASKSTSNHVNHVTVDDIVEECKTFFFAGKHTTSNLLTWTTILLAMHPQWQVRAREELVSVCGARDIPTKEDLAKLKTLSMIVNESLRLYPPTIATIRRAKADVELGPYKIPCGTELLIPILAVHHDQATWGSDATEFDPGRFSNGVSRAAHHPFAFIPFGLGARTCIGQNLALLQTKLALALMLHRFSFRLAPTYCHAPTVLMLLYPQYGAPVLFQPIPATATTTVD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02354 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 509 - -
Pumo10g02354 525 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Pumo10g02354 525 SUPERFAMILY Cytochrome P450 70 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 FunFam Cytochrome P450 734A1 25 517 - -
Pumo10g02354 525 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 Pfam Cytochrome P450 79 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo10g02354 525 CDD CYP734 79 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02354 Pumo-Chr10 34377115 34382241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02354 5 514 Cytochrome P450 AT2G26710 73.152 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02354 K15639 - gmx:100786200 924.08