Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02341 ATGGCATTCCATTTCCACATTCCCCTCCACTCGACGGCAGCAATTATGCTGATCATTATGGTTTTTTTTCATCCGAGTGAGCGAGTCAACTCGGAGCCGACTCAGGACCGGCAAGCCCTCCTTGCGTTTATCTCCCTCACCCCGCACGCGAACCGGGTTCAGTGGAACACCTCCGGTTCGGCCTGCGACTGGTTCGGCGTCCAATGCGACTCGAACCGCTCCTCCGTCCGCTCCCTCCACCTCCCCGCGGCGGGCCTCGTGGGCCCCATCCCTCCCAACACCATCGGCCGCCTCACGCAGCTCCGCGTCCTCAGCCTCCGCTCCAACGCCCTCGCCGGCGAGATCCCCGCCGATTTCGCCAACCTCACCCTCCTCCGCAACCTCTACCTCCAGAACAACCACCTCTCCGGCGAGTTCCCCGCCGCGCTGACTCGCATGACTCGCCTGACTCGCCTCGAACTCTCCTCCAACAACTTCACCGGCGAAATCCCCTTCTCGCTCAACAACCTCACCCACCTCACCGGCCTCTTCCTGGAAAACAATTCCTTCTCAGGCAACCTCCCCAGCATTACGTTGAAGTTAGCCAACTTCAACGTCTCCAACAACCGCCTCAACGGCTCCATCCCCAACGCCCTCTCACACTTCCCCGCCACCTCGTTCTCCGGAAACGACAACCTCTGCGGGACACCCTTACAGCCCTGCTCCCCCTTCTTCCCCGCTCCCGCCCCCTCCCCCTTCCCGCCCTCTCTTGTTCCACCAACGAAACATACCTCCAAGAAACTCTCCACCGCTGCCATCGTGGGAATCTCCCTCGGGTCCGCCTTACTTGCATTGCTGTTACTACTCTTAATTCTGTTTTTATGCTGCCGGCGGAGGCGGAGAGCTACAAAGCCGCCGCAGGCTGTGGTGACGACCACCGCGGAAGGTGGAACGTCGTCGTCGAAGGACGACATCACGGGATCGGTGGAGGCTGCGGAGAGGAACAAGCTGGTGTTTTTGGAGGGTGGAGTGTATGGGTTTGGGTTGGAGGATTTGCTGAGGGCTTCTGCGGAGGTTCTGGGGAAGGGTAGCATGGGGACTTCTTATAAGGCGATTCTGGAGGACGGGACCACGGTGGTGGTGAAGAGGTTGAAGGATGTGGCGGTTACCAAGAGAGAGTTCGAGGCGCAAATGGAGGTTGTTGGGAACGTTAAGCACGAGAATGTGCTTCCTCTCAGAGCGTTCTACTACTCCAAGGATGAGAAATTGCTCGTCTACGATTACATGGCCGCCGGCAGCTTGTCTGCGCTACTTCACGGGAGCAGAGGGTCAGGGCGAACGCCGTTGGATTGGGACACCCGAATGAAAATAGCCCTGGGAGCCGCAAGAGGCCTCGCGTGCCTCCACGTGTCAGGCAAGGTGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTCCACCCGAGCCACGAAGCCTGCGTTTCAGACTTCGGGGTCAACCCGATATTCGCGAACCCGGTTCCATCGAATCGGGTCGCAGGTTATCGGGCCCCGGAGGTACAGGAAACCCGAAAGCTCACTTTCAAATCCGACGTGTACAGCTTCGGCGTGCTGGTACTGGAACTTCTAACAGGTAAGGCACCGAACCAAGCCTCGTTAAGCGAGGAAGGGATCGACCTACCGCGGTGGGTGCAGTCGGTGGTTCGCGAGGAGTGGACCGCCGAGGTGTTCGACGCGGAACTCATGAGGTACCACAACATCGAGGAGGAGATGGTTCAGTTGCTACAAATTGCTATGTCGTGCGTTTCGCTCGTGCCGGATCAGAGGCCCAACATGGACGAGGTGGTGCGCATGATAGAGGATATCAGCCGCAGCGAGACCACCGATGATGGCTTACGACAGTCGTCTGATGATCCTTCGAAAGGATCAGACGGTCACACGCCCCCGCAGGACGCTAAGACTACCCCTAGGTCGGACACGGACACGTCGTAG 1971 0.5901 MAFHFHIPLHSTAAIMLIIMVFFHPSERVNSEPTQDRQALLAFISLTPHANRVQWNTSGSACDWFGVQCDSNRSSVRSLHLPAAGLVGPIPPNTIGRLTQLRVLSLRSNALAGEIPADFANLTLLRNLYLQNNHLSGEFPAALTRMTRLTRLELSSNNFTGEIPFSLNNLTHLTGLFLENNSFSGNLPSITLKLANFNVSNNRLNGSIPNALSHFPATSFSGNDNLCGTPLQPCSPFFPAPAPSPFPPSLVPPTKHTSKKLSTAAIVGISLGSALLALLLLLLILFLCCRRRRRATKPPQAVVTTTAEGGTSSSKDDITGSVEAAERNKLVFLEGGVYGFGLEDLLRASAEVLGKGSMGTSYKAILEDGTTVVVKRLKDVAVTKREFEAQMEVVGNVKHENVLPLRAFYYSKDEKLLVYDYMAAGSLSALLHGSRGSGRTPLDWDTRMKIALGAARGLACLHVSGKVVHGNIKSSNILLHPSHEACVSDFGVNPIFANPVPSNRVAGYRAPEVQETRKLTFKSDVYSFGVLVLELLTGKAPNQASLSEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMSCVSLVPDQRPNMDEVVRMIEDISRSETTDDGLRQSSDDPSKGSDGHTPPQDAKTTPRSDTDTS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02341 656 MobiDBLite consensus disorder prediction 614 656 - -
Pumo10g02341 656 MobiDBLite consensus disorder prediction 299 318 - -
Pumo10g02341 656 Pfam Protein kinase domain 350 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02341 656 SUPERFAMILY Protein kinase-like (PK-like) 351 612 IPR011009 -
Pumo10g02341 656 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Pumo10g02341 656 MobiDBLite consensus disorder prediction 298 318 - -
Pumo10g02341 656 MobiDBLite consensus disorder prediction 634 650 - -
Pumo10g02341 656 FunFam Probable inactive receptor kinase RLK902 33 191 - -
Pumo10g02341 656 MobiDBLite consensus disorder prediction 614 633 - -
Pumo10g02341 656 CDD STKc_IRAK 353 615 - -
Pumo10g02341 656 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Pumo10g02341 656 SUPERFAMILY L domain-like 34 234 - -
Pumo10g02341 656 ProSiteProfiles Protein kinase domain profile. 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02341 656 Gene3D Transferase(Phosphotransferase) domain 1 422 634 - -
Pumo10g02341 656 PANTHER OS05G0588300 PROTEIN 16 626 - -
Pumo10g02341 656 FunFam pollen receptor-like kinase 1 316 421 - -
Pumo10g02341 656 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 422 627 - -
Pumo10g02341 656 Pfam Leucine rich repeat 76 135 IPR001611 GO:0005515
Pumo10g02341 656 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Pumo10g02341 656 Gene3D Ribonuclease Inhibitor 193 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02341 Pumo-Chr10 33816402 33820957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02341 36 639 Receptor kinase-like Gene Family AT5G58300 55.916 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo10g02341 Pkinase 7.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02341 - - gmx:100784259 1060.06