Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02334 ATGGCTCCTCCATGGGTTCAAGAGCTCCATCTCCATCACTTGAGCATTCCTATAACCATTGATAAAATGATATCGGTCATGCCATCAAGGCCTATTCCTGTTAAACCAGGTGACACTTTATACCTTTCCAACCTTGATGACATGATTGGAGCTCGTGTGTTTACACCTACAGTGTACTTTTATCAATCTGACAGCACGAGTTTTTCCCAGAAACCTGTCACAAAAACACTACAGTGTGCTCTCGCTGATGTTTTGGTGCCTTATTACCCTCTCTCAGGTAGGCTTAGAGAGACCAAGAAGGGTAAACTAGAAGTGTTTTTTGCACCAGATCAAGGAGCACTCATTGTTGAGGCGCGATCTGATATTGCCTTGGCTGAATTAGGAGACCTCACAGCTCCAAACCCGGCTTGGGAACCTTTGATCTTCAAGTTTCCCGATGAAGAACAATACAAAGTCCTTGAAATGCCACTGGTCATTGCTCAGGTTACCCTTTTCCGCTGTGGTGGCTTTAGCCTTGGTTTGAGGCTATGCCATTGCATCTGTGATGGCCTGGGAGCTATGCAGTTCCTAGGTGCATGGGCTGCCACTGCAAGAACAGGGACACTGGTTATAGACCCTGAGCCTTGTTGGGACAGGGAAATTTTTCAGCCTCGTGACCCTCCTGTGGTGAAATTTCCCCACATGGAGTTTATGAGAATTGAAGAAGGCTCCAACTTGACGATGACACTATGGGAAACTAAGCCTGTTCAAAAGTGTTACAGGATCAAGCGTGAGTTCCAGAACTGTGTGAAAGCTCTTGCTCAGCCATATGATGCTGCAGGTTGCACCACTTTTGATGCCATGGCAGCTCACATTTGGAGATCCTGGGTGAAAGCTCTTGATGTAAGACCACTAGATTACCAGCTTAGGTTAACATTTTCAGTCAATGCTCGGCAGAAGCTTAGAAACCCCCCACTGAGAGAAGGGTTTTATGGCAATGTGGTGTGTGTTGCATGCACAACAAGCACTGTCTCAGAGCTTGTGCATGGACAGCTCCAAGAGACTACCAGGTTGGTGCGCGAGGCAAGACAAAGTGTCTCAGAGGAGTATTTGAGATCCACAGTGGATTATGTTGAAGTGGATAGGCCAAGGCAACTTGAGTTTGGAGGTAAACTAACAATAACTCAATGGACTAGGTTCTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACACCCACACCTCAAGTTTGTGTGTTTCTACCTGAAGGGGAAGCTGATTGTAGTGGTGGTTCCATGATTGTGTGCATATGCTTGCCTGAATCTGCTGCTCAGAAGTTCACACAAGCCTTATTGCTGGATTCAGTTTTTTGA 1383 0.4613 MAPPWVQELHLHHLSIPITIDKMISVMPSRPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQSDSTSFSQKPVTKTLQCALADVLVPYYPLSGRLRETKKGKLEVFFAPDQGALIVEARSDIALAELGDLTAPNPAWEPLIFKFPDEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGLGAMQFLGAWAATARTGTLVIDPEPCWDREIFQPRDPPVVKFPHMEFMRIEEGSNLTMTLWETKPVQKCYRIKREFQNCVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARQKLRNPPLREGFYGNVVCVACTTSTVSELVHGQLQETTRLVREARQSVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSGGSMIVCICLPESAAQKFTQALLLDSVF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02334 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 450 - -
Pumo10g02334 460 Pfam Transferase family 17 452 - -
Pumo10g02334 460 Gene3D - 239 454 IPR023213 -
Pumo10g02334 460 Gene3D - 15 232 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02334 Pumo-Chr10 33729426 33730808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02334 30 455 Monolignol Biosynthesis Gene Families AT5G48930 30.752 9.60e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02334 K15400 - gmx:100802814 885.56