Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02313 ATGATACCACAATTTACTTTGATCCAAAGAAAGCACCAGTTGCAGCAATTGCTGCAATTCTTGACTGCACTTATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTTTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACCAGGATTTGCACATGTATTATGAGGAAACTGACAGGCCAGCACGTGCTCGTACCTCAAATTTGAATGAAGAACTTGGGCAAGTTGATACTATACTTTCAGATAAAACAGGAACTTTGACTTGCAACTCTATGGAATTCATCAAGTGTTCTATTGCTGGGATTGCCTATGGCCAAGGAGTTACAGAAGTTGAGAGAGCTGTAGCCAGGAGAAAAGGAGTACCTATAGATCAAGAGTTGACAGAAGATGGCAATGTTCCAAAGTCTTCCATTAAAGGTTTTAACTTTATGGATGAAAGGATCATGAATGGAAATTGGATCAATGAACCTCACGCCAATGTAATCCAGAGCTTTCTGCGCTTGTTGGCAGTATGCCATACTGCATTACCTGAAGTTGATGAAGAAATTGGTAAAGTTTCATACGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTGGTTGCAGCCAGAGAACTCGGGTTTGAGTTTTATGAAAGGACACAGACAACTATTTCACTGCGTGAATTCAATCCCAGATCAGGCAAGACAACAGAAAGGTCATACAAACTTTTGAATATATTAGAGTTTAGTAGTACAAGAAAGCGAATGTCTGTAATTGTAAGAGATGAGGAGGGGAAACTGCTACTCTTTAGCAAAGGAGCAGACAGACACTTTTCTAAGGAGAAGTTCACACTTGTGTCATGTTTGAACGACTTGCGAGGAATAGGAAGGGAGTTTGAAGAGAAGACTAAGCAGCACATTGATGAATATGCTGATGCTGGTTTGAGGACCTTGATACTTGCCTATCGTGAACTTGATGAAGAGGAGTACAATCTATTCAATAAAGAATTTATGGAGGCCAAGAACTTAGTGAGTGCAGATCGGGAGCAAATTGTGGAGGAAATATCAGAAAAGATTGAGAAGGATTTAATTCTTCTAGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCAGGAATTAAGCTATGGGTTCTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGGTTTGCTTGTAGTTTGCTCAGACAAGGAATGAAGCAAATTATAATTAGTTCAGACACTCCAGAAACCAAATCACTGGAGAAAGGGGAGGACAAGTCTGCTGTTGCAGCGGCAATTAAGGCAAGTGTTATTCATCAATTAACGAAAGGAAAGGAATTACTTGCTGAATCTGATGAAAACTCTGAGGCATTAGCTCTTGTCATTGATGGGAAGTCTCTCACTTATGCACTAGAAGATGATGTAAAGGACTTATTTCTTGAACTTGCTGTTGGCTGTGCATCTGTCATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTTGTTACTAGACTAGTAAAGATTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCAGACATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGATGTTGCCATTGCCCAATTTCGGTTTCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAGAACATTGCCTTCGGCTTCACCCTCTTCTTCTACGAGATCTATGCCTCGTTCTCAGGGCAAGCTGCATACAATGATTGGTACCTCTCACTATATAATGTATTCTTCACTTCCCTTCCTGTAATTGCCTTGGGAGTGTTTGATCAGGATGTCTCTGCTAGACTATGCCTCAAGTTCCCATTACTATACCAAGAAGGTGTACAAAATGTCCTATTTAGCTGGAAACGGATCCTCGGTTGGTCGTTCAACGGAGTCTTGAGTGCCACCATAATCTTCTTCTTCTGCATCAACGCGATGGAGAATCAAGCATTCCGAAAAGCCGGGGAAGTTGCTGATCTTGAAGTTCTTGGTGCCACCATGTACACTTGTGTTGTGTGGGTGGTGAATTCCCAAATGGCATTATCCATCAGCTACTTCACTTACATACAACATCTATTCATATGGGGTGGCATTATCTTTTGGTACATATTCCTCTTGGTGTATGGAACCATGGACCCCTCTCTATCAACCACTGCCTACAAGGTCTTGATTGAAGCCTGTGCACCAGCACCATCCTACTGGCTCATCACTTTGCTTGTGCTTGTTGCTTCACTCCTTCCATACTTCGCCTACGCTTCGATCCAAATGCGGTTCTTCCCCATGTTCCATCAAATGATACAGTGGATAAGAAATGATGGCCAAACATCTGACCCAGAATATGTTAATATTGTTAGACAGAGATCAATAAAGCACACAACAGTTGGCTTCACAGCTCGTTTTGAAGCATCTCATAGTTCAGGAGCATCCAAAAGTATTCAAGTTTGA 2577 0.4121 MIPQFTLIQRKHQLQQLLQFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYYEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVERAVARRKGVPIDQELTEDGNVPKSSIKGFNFMDERIMNGNWINEPHANVIQSFLRLLAVCHTALPEVDEEIGKVSYEAESPDEAAFVVAARELGFEFYERTQTTISLREFNPRSGKTTERSYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADRHFSKEKFTLVSCLNDLRGIGREFEEKTKQHIDEYADAGLRTLILAYRELDEEEYNLFNKEFMEAKNLVSADREQIVEEISEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPETKSLEKGEDKSAVAAAIKASVIHQLTKGKELLAESDENSEALALVIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWSFNGVLSATIIFFFCINAMENQAFRKAGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLFIWGGIIFWYIFLLVYGTMDPSLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYFAYASIQMRFFPMFHQMIQWIRNDGQTSDPEYVNIVRQRSIKHTTVGFTARFEASHSSGASKSIQV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02313 858 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 804 IPR023298 -
Pumo10g02313 858 NCBIfam phospholipid-translocating P-type ATPase 10 811 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo10g02313 858 ProSitePatterns E1-E2 ATPases phosphorylation site. 85 91 IPR018303 -
Pumo10g02313 858 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 817 - -
Pumo10g02313 858 SFLD p-type atpase 67 577 IPR044492 -
Pumo10g02313 858 PRINTS P-type cation-transporting ATPase superfamily signature 83 97 - -
Pumo10g02313 858 PRINTS P-type cation-transporting ATPase superfamily signature 412 422 - -
Pumo10g02313 858 PRINTS P-type cation-transporting ATPase superfamily signature 526 545 - -
Pumo10g02313 858 Gene3D - 190 362 IPR023299 GO:0000166
Pumo10g02313 858 NCBIfam HAD-IC family P-type ATPase 493 609 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02313 858 FunFam Phospholipid-transporting ATPase 362 566 - -
Pumo10g02313 858 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 128 364 IPR023299 GO:0000166
Pumo10g02313 858 Gene3D - 363 566 IPR023214 -
Pumo10g02313 858 SFLD Haloacid Dehalogenase 67 577 - -
Pumo10g02313 858 Pfam Phospholipid-translocating P-type ATPase C-terminal 554 804 IPR032630 -
Pumo10g02313 858 SUPERFAMILY HAD-like 78 581 IPR036412 -
Pumo10g02313 858 FunFam Phospholipid-transporting ATPase 194 362 - -
Pumo10g02313 858 Pfam Cation transport ATPase (P-type) 184 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02313 Pumo-Chr10 33280506 33284919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02313 10 850 Primary Pumps ATPases AT1G68710 69.406 0.0 1258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02313 K01530 - gmx:100797039 1544.64