Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02305 ATGAGCAACCCTTCAGATGAGAGGGAGCAGTGTCAAAAGAAGAGGAAATCTACCATATGTGAAGCCAGCTCTGACTTTAGGACATCAAGGAGAAGATTCTGCAGCAGCAACAAAAATGAAGAGGAGATGAACAAGGAAGTTTCAACAACATTGAAGCTTTATGATGATCCGTGGAAGATCAAGAAGACGCTAACCGATAGCGATTTGGGAATCCTAAGTAGACTCTTGCTGGCTGCAGATTTGGTGAAGAAGCAAATCTTGCCTATGTTGGGTGCAGATCATGCAAGAGCTGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAACTCGTCCTAAAGCGTTGGTCTTCATCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTCGTGAGGAGAAGAGATCTAAAGAAAGGTGATGAGATCGGATTTCATTGGGATCCATATAATTGCGTTTTCAATTTCTGTGTCCTTAAACGAGCTATGCCAGAGAATTAA 528 0.4299 MSNPSDEREQCQKKRKSTICEASSDFRTSRRRFCSSNKNEEEMNKEVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGADHARAAETEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCVFNFCVLKRAMPEN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02305 175 SUPERFAMILY DNA-binding pseudobarrel domain 56 168 IPR015300 -
Pumo10g02305 175 Gene3D - 57 172 IPR015300 -
Pumo10g02305 175 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 27 170 - -
Pumo10g02305 175 CDD B3_DNA 58 169 IPR003340 GO:0003677
Pumo10g02305 175 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02305 Pumo-Chr10 33040646 33041173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02305 60 155 RAV Transcription Factor Family AT1G50680 34.951 2.17e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02305 - - gmx:102667341 335.109