Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02278 ATGAAGACGCCAAAACGCCACTCGCCGCCGGCAAACGCTGGCCGGCGAGTGGATGCCGATTCCGGCGAGATCGTCACGAGGTTCAAGAACGGTTGCCGGAGGAGGCTCAAAATCAAGCGAATGAAGTACACTTGCCAGACGAAGATCCGCGTCGGGAATGGCGCCGGAGGCGTGCCTCCGCCGCTGGCCGTGGATTCGGAGGGAGAGAAGAGAGAGATTCACGAGCACGTGGAGATATCGCTGGCGTCGTCGTCGTCGTCGTCATCGGAGGAGGAGGAGCGGTTGTCGTCGAAGCAAAACGACGGTGTTTTGTCGTACGGCTCGGCGTCGGTGATAGGGAGCAGGAAGGAGATGGAGGACGCGTTGAGCGCGGAGATAGGGTTTGTGGCGAAGGAGAGAGGGAAGTGCGACTTCTTCGCAGTGTACGACGGCCACGGCGGAGCTCAGGTGGCGGAGGCGTGCCGGGAGAGGCTGCACCGGCTGGTGGCGGAGGAGGTGGAGAGGAGTGAGAGCCACGTGGAATGGGACTGGCGGGGAGTGATGGAAGGGTGTTTTCGTAAAATGGACAGCGAGGTCGCCTGTAATGCGGCTGTCAGGACGGTGGGTTCCACGGCGGTTGTCGCCGTCGTCGCGGCGGCGGAGGTCGTCGTGGCTAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGGAGGTGAGGCCGTGGACTTGTCTAGTGATCATAAGCCCTACAGGCCCGATGAGTTGATGAGAATCGAAGAGGCCGGTGGAAGGGTCATAAACTGGAATGGCCAGCGTGTGCTTGGTGTTCTTGCCACTTCGCGATCCATAGGAGATCAGTACCTTCGACCTTATGTAATATCAAAACCAGAAGTGACAGTGACGAAGCGAAGCAGTAAGGATGAATTTCTTATACTAGCAAGTGATGGATTGTGGGATGTGATGTCCAGTGAAGTGGCGTGTCAAGTTGTAAGGAAATGCCTCAACGGGCAGATTAGGAGAGTGTGCAATGGAGTTGGGAATCATCAAAACCGTGCTGCCGAGGCTGCAGGCCTGTTGGCTGAGATAGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTCGAGCTAAGAGGAACAGTAACATCTGATTGA 1140 0.5675 MKTPKRHSPPANAGRRVDADSGEIVTRFKNGCRRRLKIKRMKYTCQTKIRVGNGAGGVPPPLAVDSEGEKREIHEHVEISLASSSSSSSEEEERLSSKQNDGVLSYGSASVIGSRKEMEDALSAEIGFVAKERGKCDFFAVYDGHGGAQVAEACRERLHRLVAEEVERSESHVEWDWRGVMEGCFRKMDSEVACNAAVRTVGSTAVVAVVAAAEVVVANCGDCRAVLGRGGEAVDLSSDHKPYRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRSSKDEFLILASDGLWDVMSSEVACQVVRKCLNGQIRRVCNGVGNHQNRAAEAAGLLAEIALAKGSRDNTSVIVVELRGTVTSD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02278 379 MobiDBLite consensus disorder prediction 1 21 - -
Pumo10g02278 379 CDD PP2Cc 105 372 IPR001932 -
Pumo10g02278 379 Pfam Protein phosphatase 2C 106 365 IPR001932 -
Pumo10g02278 379 FunFam Protein phosphatase 2C 51 98 379 - -
Pumo10g02278 379 SUPERFAMILY PP2C-like 101 373 IPR036457 -
Pumo10g02278 379 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
Pumo10g02278 379 MobiDBLite consensus disorder prediction 51 101 - -
Pumo10g02278 379 Gene3D - 97 376 IPR036457 -
Pumo10g02278 379 ProSiteProfiles PPM-type phosphatase domain profile. 105 372 IPR001932 -
Pumo10g02278 379 PANTHER PROTEIN PHOSPHATASE 88 372 IPR015655 GO:0004722|GO:0006470
Pumo10g02278 379 SMART PP2C_4 95 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02278 Pumo-Chr10 32005131 32008251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02278 98 373 PP2C-type Phosphatase Gene Family AT1G07430 47.692 1.23e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02278 K14497 - gmx:100807235 618.616