Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02258 ATGGAATGCACCATGTTGTTACCTGCCATTGGATCTGTTTTCCCTCGTGGTGCCTTTGCAGCAGTCTTGCTCCTGTTGCTGTTTTCTTTCTCCACATTCACTACTACAGAAGCCTATGATCCACTTGATCCAACTGGCAATATAACAATCAAATGGGATGTCATTAGCTGGACTGCAGATGGCTATGTTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCACATTCAGGCCCCTGGATGGTCATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAAATTCAAAGCAGGTATTCCACATTGTTGTAAGAAGGACCCTCTAGTGGTGGATTTACTGCCAGGGACTCCTTATAACCAGCAGATTGCAAATTGTTGCAAAGGGGGTGTCCTAAATTCATGGGGTCAGGACCCCAGCACTGCAGTAAGTTCTTTCCAGGTTAGTATTGGTTCTGCCGGAACGACAAACAAGACGGTCAAAATGCCTAAAAATTTCACCCTCAAAGCACCAGGACCTGGCTATACTTGTGGTCCTGCCAAAGTTGTGAAACCAACTACATTTATTACCAGTGACAAGAGGAGAATCACCCAAGCAATGATGACCTGGAATATTACTTGCACTTATTCTCAATTCCTGGCTCAAAAAACACCAAGTTGCTGTGTTTCCCTCTCATCCTTCTATAATGACACGGTAGTAAACTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACAGAACCTGGCAGTTGTGTAGATCGAAATTCCCCTCATTTATCTTCAGTTGTATCACCATCAGGCAAAGCAGCAAACACACCTCTAGTCCAGTGTACCAGCCATATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCAACTACAAAGAGTACTGGAGGGTCAAGATCACAATCACAAATTTCAATTACAGAATGAACTACTCACAATGGAACCTTGTTGTGCAGCATCCCAATTTAGATAATATTACCCAGCTCTTCAGTTTTCAGTACAAGTCACTAAATCCCTATGAGGGCTTGAATGATACAAGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGACCTCTTGGTAATGTTCAGTCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCCTTCCCTAGAAGGATTTATTTCAATGGGGATAACTGTGTTATGCCTCCTCCAGATGCCTACCCTTGGCTGCCAAATGCAAGTTCTAAACTAGTTTTCTCTTTACTAAGTACAGTCATAGCCACTTTAGCTTCTTTGTTAATCTTATTGAATCAATCATAG 1374 0.4279 MECTMLLPAIGSVFPRGAFAAVLLLLLFSFSTFTTTEAYDPLDPTGNITIKWDVISWTADGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGGQTTEQGDCSKFKAGIPHCCKKDPLVVDLLPGTPYNQQIANCCKGGVLNSWGQDPSTAVSSFQVSIGSAGTTNKTVKMPKNFTLKAPGPGYTCGPAKVVKPTTFITSDKRRITQAMMTWNITCTYSQFLAQKTPSCCVSLSSFYNDTVVNCPTCTCGCQNKTEPGSCVDRNSPHLSSVVSPSGKAANTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFSFQYKSLNPYEGLNDTSMLWGVKFYNDFLSSAGPLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIATLASLLILLNQS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02258 457 PIRSF COBRA 11 456 IPR006918 GO:0010215|GO:0016020
Pumo10g02258 457 PANTHER PROTEIN COBRA 26 444 IPR006918 GO:0010215|GO:0016020
Pumo10g02258 457 Pfam COBRA-like protein 62 225 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02258 Pumo-Chr10 31455748 31459571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02258 21 454 COBRA Gene Family AT3G02210 72.644 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02258 - - gmx:100815779 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02258 10 31455748 31459571 Pumo10g02258 10 31455748 31459571 ECH