Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02251 ATGCGTCACTTCACTTCACTTCACTTCCCCATGGCCTTAGCACCACCCACTTTCTCCTCTTCCCTCTCCAAACCATCCTCTCTCCCTTTCCCCAAAACCCTCCGAATAACCCACACTCTCCCTCGCGCCGCCGTCAAAAGCCCTCTCCTCGTTATCTCCAAAAACCCGATTTCCGATATGGCGTCGTTCGGCGCGTGGGAGGACGAGAAGCTGCGCGAGGAGTGCGGCGTGGTGGGCATATATGGCGACCCGGAGGCGTCGTGCCTCTGCTACCTTGCCCTACACATGCTCCAGCACCGCGGCCAGGAAGGCGCCGGAATCGTAACCGTCCACAACAACGTCCTCCAATCCATCACGGGCGTGGGCCTGGTCTCCGAAGTGTTCAACCAGTCGAAGCTGGACCAGCTCCCTGGCAGGCTCGCCATCGGCCACGTCCGCTACTCCACCGCCGGCCAATCCATGCTCAAGAACGTGCAGCCCTTCGTCGCCGGCTACCGCTTCGGCTCCGTCGGGGTGGCCCACAACGGAAACCTCGTCAACTACCGCACCCTCCGAACCAACCTCGAGGACAGCGGCTCCATCTTCAACACCACCTCCGACACCGAAGTCGTCCTCCACCTCATCGCCACCTCCAAACACAGACCCTTCATTTTGCGAATAGTCGACGCCTGTGAAAAGCTCCAAGGTGCTTATTCCATGGTCTTCGTCACCGAGGACAAGCTTGTCGCCGTTCGCGACCCCTTCGGGTTCAGGCCTTTGGTTATGGGGAGAAGGAGCAACGGTGCTGTTGTTTTTGCTTCCGAAACTTGTGCTCTTGATTTGATTGAAGCCACTTATGAGAGGGAGGTTTACCCTGGTGAGGTTATCGTGGTGGATAAAAACGGTATTCAGAGTCTCTGTCTCATGTCTCATCCTCAGCCAAAGCAATGCATTTTTGAGCATATTTACTTTGCGCGGCCTGATTCGCTTGTTTTCGGGAGGTCTGTGCAAGACTCTCGTCATAAATTTGGGGAGATTTTGGCGACTGAGAGTCCTGTGGAGTGTGATCTTGTGATAGCTGTTCCTGATTCTGGGCTTGTGGCTGCGCTTGGTTATGCTGCAAAATCTGGGGTTCCGTTTCAGCATGGTTTGATTAGGTCACCCTACGTGAAGAGGACTTTCATTGAGCCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGCTCAAGCTATCACCCGTGCGTGCCGTGCTTGAAGGTAAACGTGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACCTCGTCCAAAATTGTTAGGTTGTTGAAGGAGGTTGGTGGTGCTAAGGAGGTTCACATGAGGATTGCTAGTCCTCCGATTATTGGGTCTTGTTACTATGGTGTGGATACTCCTAGCTCTCAAGAGTTGATTTCTAATAAGATGAGTGTGGAGGAGATAAGAGACTTTATTGGGGCGGATTCGCTGGCCTTTTTGCCTTTTGATAGCTTGAAGAGGTTGTTGGGGAGTGAAAGTCCAAATTTTTGTTATGCTTGTTTCTCTGGGAATTACCCTGTGGAGTCCAGAGAGCTCAAGGTGAAGAGGGTTGGGGACTTCGTGGATGATGGCTTGCATGGGAGCTTGGAGTCTATTGATGGAGGTTGGGTGCAAGCAAACTGA 1656 0.5302 MRHFTSLHFPMALAPPTFSSSLSKPSSLPFPKTLRITHTLPRAAVKSPLLVISKNPISDMASFGAWEDEKLREECGVVGIYGDPEASCLCYLALHMLQHRGQEGAGIVTVHNNVLQSITGVGLVSEVFNQSKLDQLPGRLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRTNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLQGAYSMVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVIVVDKNGIQSLCLMSHPQPKQCIFEHIYFARPDSLVFGRSVQDSRHKFGEILATESPVECDLVIAVPDSGLVAALGYAAKSGVPFQHGLIRSPYVKRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEVGGAKEVHMRIASPPIIGSCYYGVDTPSSQELISNKMSVEEIRDFIGADSLAFLPFDSLKRLLGSESPNFCYACFSGNYPVESRELKVKRVGDFVDDGLHGSLESIDGGWVQAN 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02251 551 Hamap Amidophosphoribosyltransferase [purF]. 74 516 IPR005854 GO:0004044|GO:0009113
Pumo10g02251 551 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 75 298 IPR029055 -
Pumo10g02251 551 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 75 294 IPR017932 -
Pumo10g02251 551 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 75 517 IPR029055 -
Pumo10g02251 551 Pfam Phosphoribosyl transferase domain 329 445 IPR000836 -
Pumo10g02251 551 CDD PRTases_typeI 337 449 IPR000836 -
Pumo10g02251 551 NCBIfam amidophosphoribosyltransferase 75 517 IPR005854 GO:0004044|GO:0009113
Pumo10g02251 551 CDD GPATase_N 75 325 IPR035584 -
Pumo10g02251 551 PIRSF Pur1 71 530 IPR005854 GO:0004044|GO:0009113
Pumo10g02251 551 Gene3D - 334 499 IPR029057 -
Pumo10g02251 551 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 73 522 - -
Pumo10g02251 551 Pfam Glutamine amidotransferase domain 153 272 IPR017932 -
Pumo10g02251 551 SUPERFAMILY PRTase-like 310 521 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02251 Pumo-Chr10 31349943 31351598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02251 67 549 PRT Gene Family AT2G16570 83.093 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02251 K00764 - gmx:100791919 946.421