Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02247 ATGGAGACTGATATTAAGAGTCCCTCCAGTACCCAAAAGGGGTTTGGGCCACACTCTAGAAAATCACAGGATGATTCAGAAATATCTCCACATTTACAAGAGTCTAAGGAAACCCGTCGCCGTAAAAAAGCTGGTTCACGTTGGACTAGTGATGGATGTATTGTGCATAACCTTGAAAATCAGGTGTCTGTTAATTTTGCTGCGTCGGTAGAAGCTTTCAAGGGCAAAGATAGATTAGAGGGTACTGGCATTGACAGTGGTAGTAAAAGTGGTAATGCTGAAAAGGAAGATGAGGAGAAAGCCTCAAAGTTTGAACCAAATGTTGTGAAAGTAGATGAATTCGGAAGACATCTAAGAGAAGGTCTTACAGATAGTGATTCAGATGATTCACGCCATCATCGGACAAGGAGACTAAACAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGACAGGAGGAGTAGGAGGAATAGGAGGAGTCCCAGGAGGAGAAGGGATAAAAGAAACAGGTCTCGCAGCTGGTCCCCCCGGCACCGAAGAAGCAGGAGTAGGTCTCCAATCTCAAGACGTTCAGGTGACTTTCGTGGTGAGAATGTGAAAAGGGACAAGGATCAGTGCTTGGACTTCCTTCGAGGAAAGTGCTATCGAGGAGCATCTTGCAAGTACATTCACCATGAATCTGACATGAATGCTACTTCAAGGCGCTATAGGAATAAACATGATCTGGAAGCCAGTTCTCATGCAAAAGAATCTAAGACTAATGGAGACACGAAAAATATTTCTTCTAAAGTGTTGGATAATGAGCGTGATGGAGTCAGAAGTCAGGATGTGGATCTTAGCCAGAATGTAACTAGCCAGGAAGTAATGCAGAAAAAAGAAGATTCAGGGAGGCATGCTGTTGCATCAACTACCACTCATCTTGATGGTCAATCAGTTAATAGCAATCCAAGAAAATCTGAATGTATCAGAGAGGTTGCTCCTGAAATTGAGGAAAACATAGTAGTCAGGGAAGAGCCTAAGACTTTAATCCATGAAAATGATGGTTTGAAAGCAGGGGATTCTCATCAGCAGCACTTGGTTGATGGCTTTCACCCTGAAGCTTTAGGCAGTGGTGATACTTCTAAACCATCTGGTACATATAAAGATGTCATTCCCTCAGAAGATGGTCCATTTGTGCAGCAAACGCAACTCAATGTTTCTGCTGCTGGAATTCCAGAACATTCTGGTTACCCATCTCAGCATGTAAATGCATCCTTTGTGACTGATTCATCACCTGATAAAAGATCAATTGTTTCTGCTAGTGTTAATAAAGTTCCTGGTAGTGAACCTTTACCATATATGTTATCATCCACTCAGCTACAGTCAGCCACTAGTTCTGTTGGGCAATGTGTCACATCAGAGCAGCCTTCATTGCACTCTCAGGCTTCTAAAGAGTTACCTCCTCACAGTGGTTCTTCAGTGGAATTACCGCTTCATACTTACCAGTTGCCTGCTTCTGTTGTTTCACATTCCCAGGGTGAAAATCCTGTGCATATGCCACAAATTTCAATGCAGTATGGTGCAATGCAACAAAGTGCATTCTTTCCTTTCCAATCCAATACCAGAGAAAAGTTTGAACCTTACCCAGCTCCATTACACATGCAGAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCCTTGCCACTGCCACCGCCGCCGCCGCCACCATCAAGAGAGGTGTATAATTCCAGTTTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAATTCAATCAGAGTCAATTGCATTCGAGAACTGACTTTATTTCTCAGAAGACTTCCATGAAGCCTGGGTTACCAACTAGTTCTCAGAATTCTGAATTTCAGGATCAAGCATACCCTCCAATGCAGGATCATTCACGAGTTTTCATGCTTACAGAACCTTTCTCTCCAAAGCATCTCCCTCAGGGGAACCCAGCTAGTCAATTGCTTTCAGGCTCTAATCTCAATAGAGATGACTTTCATAATCAACTTTCAATGCAGGATTCAAAATTTTCAAGTACGACATCATTTGGCAGCTTGCAGCCTCAACCAAATCAATTTTCCTGGAAGTTGGATGTGAACAGACTACAACCTTCTCTGGGTGGCAAGTTGCCTCCTGAAGGACATTTGATGGCATCTTCCCACATAGATTCGTTGTCACAGAAGCAACAATCAATGCATAATTTTCAATATTCTATAACCGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCATCTTTTGGGGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAAGTATTTTTAGACAGGAAAATGAAATAATCCACGGTAACAATTATGCTTCTTCTAGATTGAACCATACTCCTGTAAATGGGGAAGGTGATGATGGGGTTGGATCAAGACAAGTCAGCATCCTCATCAAAATCAGCTAG 2553 0.4242 METDIKSPSSTQKGFGPHSRKSQDDSEISPHLQESKETRRRKKAGSRWTSDGCIVHNLENQVSVNFAASVEAFKGKDRLEGTGIDSGSKSGNAEKEDEEKASKFEPNVVKVDEFGRHLREGLTDSDSDDSRHHRTRRLNKRDRSWSRSRSPPDRRSRRNRRSPRRRRDKRNRSRSWSPRHRRSRSRSPISRRSGDFRGENVKRDKDQCLDFLRGKCYRGASCKYIHHESDMNATSRRYRNKHDLEASSHAKESKTNGDTKNISSKVLDNERDGVRSQDVDLSQNVTSQEVMQKKEDSGRHAVASTTTHLDGQSVNSNPRKSECIREVAPEIEENIVVREEPKTLIHENDGLKAGDSHQQHLVDGFHPEALGSGDTSKPSGTYKDVIPSEDGPFVQQTQLNVSAAGIPEHSGYPSQHVNASFVTDSSPDKRSIVSASVNKVPGSEPLPYMLSSTQLQSATSSVGQCVTSEQPSLHSQASKELPPHSGSSVELPLHTYQLPASVVSHSQGENPVHMPQISMQYGAMQQSAFFPFQSNTREKFEPYPAPLHMQNAHFNVPPNSSWTSLPLPPPPPPPSREVYNSSLNSGVVKSYISSEFNQSQLHSRTDFISQKTSMKPGLPTSSQNSEFQDQAYPPMQDHSRVFMLTEPFSPKHLPQGNPASQLLSGSNLNRDDFHNQLSMQDSKFSSTTSFGSLQPQPNQFSWKLDVNRLQPSLGGKLPPEGHLMASSHIDSLSQKQQSMHNFQYSITEANLGVPGETATVSRYPPDFLDSNHSTSLPSFGGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIIHGNNYASSRLNHTPVNGEGDDGVGSRQVSILIKIS 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02247 850 MobiDBLite consensus disorder prediction 243 277 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 1 17 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 18 47 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 302 320 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 74 201 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 405 427 - -
Pumo10g02247 850 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 20 834 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 1 53 - -
Pumo10g02247 850 Gene3D - 202 262 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 90 135 - -
Pumo10g02247 850 ProSiteProfiles Zinc finger C3H1-type profile. 202 229 IPR000571 GO:0046872
Pumo10g02247 850 MobiDBLite consensus disorder prediction 153 187 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 413 427 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 466 483 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 466 488 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 364 389 - -
Pumo10g02247 850 MobiDBLite consensus disorder prediction 243 321 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pumo10g02247 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02247 - - gsj:114409657 1305.81