Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02244 ATGGCAGCAAAGCTCCTGCATTCCTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATTGGATGCATGACTGGGATTTTCCAACTCTTTGATCGCCACCATATTGTCACGGCTCGCCGCATTAGCCAGAAGAGGCTTCCTTCTGGTAATTCTCACTTCAGTGATGGCAGCTTGGAAAGAGATTCTGATAACATACTCCATCGACAAACAGCAACTGATACTAGCTTAAACAAGGGTGTGAATGAAAGGCAAAGAATTTCTACTGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCGGTGTCCTCTCTGGACTGCAAGGCTGAAGCAGAGGCTCCATATGACCGGATTCTTTTTCCTGAAACTCCTTCAAGGGATGCAGCTATGAACCAATCAACCATCTATCCTCATTTTGGATGTAACTCCCTTGACCTGAGGGATGTGGTAAAAGATTCGATGTATAGGGAAGCTCGAGGACTGTCAGTGAAGACTACAGCCAAAGAGGAATCTGCCATTAACACCACAAAGCACAGGGATTCACCACGACCTATTCAGTTGTCAAAATCTGTTGATGGATCTTACAGAGTTGGAATAGATGGCAAACAAAGTGTGCCTATTGATCTAAAGGAGTCCTTCCGAGTCCTTGCTAAACTTAGAGACGCGCCTTGGTATTATGCAGAAACTACAGAACTTCCGAGATCATCACATGAAGTAAAAGATGGACACTGGCATTCCATCTCAAAGGATGCTCCTTGGTTTGCTTATGAAGGAAAAGAAATAAGCCGTTTATCTTTCGAATCACGAGATACCATCAAATCCACACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAGGAAGGTTCATTGTGCACTTACAGCTCTGATTCAAAAGCCACTCACCACTCAAGAAACATTTACAGTGGCACCTCCAACTCAAATGACAAATTCCCTTACCCTACAACAACCTTCAGCAACCCCAAATCGTCCACCTAG 1005 0.4388 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHIVTARRISQKRLPSGNSHFSDGSLERDSDNILHRQTATDTSLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEAEAPYDRILFPETPSRDAAMNQSTIYPHFGCNSLDLRDVVKDSMYREARGLSVKTTAKEESAINTTKHRDSPRPIQLSKSVDGSYRVGIDGKQSVPIDLKESFRVLAKLRDAPWYYAETTELPRSSHEVKDGHWHSISKDAPWFAYEGKEISRLSFESRDTIKSTPKLKELPRLSLDSKEGSLCTYSSDSKATHHSRNIYSGTSNSNDKFPYPTTTFSNPKSST 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02244 334 PANTHER LONGIFOLIA PROTEIN 1 320 IPR033334 GO:0051513
Pumo10g02244 334 MobiDBLite consensus disorder prediction 41 98 - -
Pumo10g02244 334 MobiDBLite consensus disorder prediction 291 334 - -
Pumo10g02244 334 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02244 Pumo-Chr10 31237186 31239217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02244 130 303 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 41.954 1.37e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02244 - - gmx:100787391 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02244 10 31237186 31239217 Pumo10g02244 10 31237186 31239217 ECH
Pumo4g01214 4 15501865 15506607 Pumo10g02244 10 31237186 31239217 PCT