Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02243 ATGGGCTTGGAAGTGTTACCGGATTCCTCTTTGGCTGGTGATGCTCAATCAAGTTCAACTGAAACTTATTCAGCTCAAGATAATGGTCAATTTCCAAGATCATCAAAAAATGGTCTAGCCAGGCCACTCCGAGTTTCTAATTCTCCAAAAATCTCTTCAAAAGACCCAACTTCCCCACGGCGAAAGAATCCTGATCTGGTTATGAAACCCATCTCAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAAACAGCAAGATGGAAATCGAAGCTCCCAGAAACCGAATTTAAGGGGTGTAAAAGCTCCAGCAAGAGCACCAGATTCCTTTCCTTCAGTTTATAGTGAGATAGAAAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTTGAAGCAATGCAAGAAAAGGGGCTATTAGAGAGCAGAAAAGAAGAACAAGCTCCAAATGTTGTTGGAAGTCAAAGTGATTATGAACCAAAAGCTACCAATCAAAATCAGAATACCAGGTCAGTAAGGCAACAAAATACTCAGAGAAACAATTTTCTATCTTCCACACTCAAGGGATCTGACTCAGCAAGGCCTTTTGAATCCCCAATAGTGATAATGAAACCAGCAAAACTTGTTGAGAAAACTGTGATTCCTGCTTCTTCAGTAATTCCAATTGGTGGCCTTTCTGGTTCCCAGAAACACCAGAATGGTGGTGTATGTGTAGATAATAAAACCAGTACATCTTCTACTCGAGTAGCAAAAGATCAGTCTCCCAGAAACATTCACCGGGATGCTTCTGCCAGTTCCATTGATAAGAAAGCAAGTAGTAGTAAGACTACAAGATCAGTACAATCTCAATCTAGGCCTCAACAACTTCCAAAAGAAAATAGCCAAAGTTCAGTGAAGCACTCAGGATCTGTGAGCCCAAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGGTCTCGTCCACCTGCCCCACCATCAGATTCAAACAAACCCAGAAGGCAATCTGGTAAGAAGGCTACAGAATCGGGTTCACCAGGCGGAAGGCAAAGACCCAAATCCCTCAACTTACAGCATGGTGATGAGCAACTGAGTGAGATTAGCAATGAATCAAGGAGTTTAAGTTGCCAGGGGGATGAAATTTCTCTGCAATCAGACAGTTTAACTGTCAACTCAAAGATGGATATGGAGGTCACAAGTAGTTTACAAACTGCTGAAATTGATTACAGCCAAAGCCCATCTTTGAAGGCTGTGAAGCAATTGATTTCAGAGACAGTGCAGAAAAAATCAACTCCAAGGTTGGATGAGGATGAGACAGTTGCAGAACTTGCAACAGATGCCCCGGAACATCCAAGTCCTATCTCAGTTCTTGATGGCTCAGTGTACAGAGATGATGTGCCATACCCAGTAAAGCAGATATCTGAAGATTCAAAAGGTGAGGATGCTCAAGAATCCAAAGAAAATGAGATTAAAGATCAGTGGAACCCTGCAGATAGCCTTTCATTTAACAGCACCGGATCCCTAGAGATCAATCGCAAGAAATTACAGAACATAGATCACCTTGTTCAGAAGCTTCGACGGCTGAACTCCAGTCATGATGAAGCCAGAATCGATTACATTGCTTCCCTGTGTGAAAACACAAATCCAGACCACAGATACATCTCCGAAATATTATTAGCTTCAGGTCTCTTACTCAGAGATCTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCGTCGGGTCATCCCATTAACCCCGAGCTATTCCTTGTCTTGGAACAGACTAAGGCAAGTAGTCTGCTTTCGAAAGAAGAAAGCAGCCCCGGAAAAGATGCTAACACGAAGCTGAACAAAGAGAAATTTCACAGGAAACTCATCTTTGATTCTGTCAACGAGATTCTTGGTGCTAAATTCGGTTCCTCCCCAGAGCCATGGTTTCAGCCTAATAACAGTAACAGACTCACAAAGAAAACCTTGAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATCGAAAAGATTCAAGCCAAGAAGCCAGAATGCTGCTTAGAAGAGGAAGATGATGGTCTGAAAAGTATGCTGTGTGAAGATGTTATGCATGGCTCAGAAAGTTGGACAGATTTTCATGGCTATTTACCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTAGTAGATGAGGTTGTGATTGGTGAATCAGCTGGTTTGCGAGTCAAGCCATCTGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 2289 0.4233 MGLEVLPDSSLAGDAQSSSTETYSAQDNGQFPRSSKNGLARPLRVSNSPKISSKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDGNRSSQKPNLRGVKAPARAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNVVGSQSDYEPKATNQNQNTRSVRQQNTQRNNFLSSTLKGSDSARPFESPIVIMKPAKLVEKTVIPASSVIPIGGLSGSQKHQNGGVCVDNKTSTSSTRVAKDQSPRNIHRDASASSIDKKASSSKTTRSVQSQSRPQQLPKENSQSSVKHSGSVSPRLQQKKLELEKRSRPPAPPSDSNKPRRQSGKKATESGSPGGRQRPKSLNLQHGDEQLSEISNESRSLSCQGDEISLQSDSLTVNSKMDMEVTSSLQTAEIDYSQSPSLKAVKQLISETVQKKSTPRLDEDETVAELATDAPEHPSPISVLDGSVYRDDVPYPVKQISEDSKGEDAQESKENEIKDQWNPADSLSFNSTGSLEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSPGKDANTKLNKEKFHRKLIFDSVNEILGAKFGSSPEPWFQPNNSNRLTKKTLSAQKLLKELCFEIEKIQAKKPECCLEEEDDGLKSMLCEDVMHGSESWTDFHGYLPGVVLDVERLIFKDLVDEVVIGESAGLRVKPSVRRRKLFGK 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02243 762 PANTHER LONGIFOLIA PROTEIN 1 760 IPR033334 GO:0051513
Pumo10g02243 762 MobiDBLite consensus disorder prediction 1 111 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 157 201 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 347 398 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 146 203 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 276 317 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 233 261 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 233 398 - -
Pumo10g02243 762 MobiDBLite consensus disorder prediction 11 54 - -
Pumo10g02243 762 Pfam Domain of unknown function (DUF4378) 558 739 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02243 Pumo-Chr10 31234183 31237169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02243 1 761 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 51.210 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02243 - - gmx:100787391 1374.38