Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02231 ATGGCGATGGCTGCTGCTCTGCGTCGCGAAGGGAGGCGGTTGACCCAACCGATCAACGCCCTCCATTCCTCTCTCATCTCTCATCAAGACCAAGCCCCTCATGGCGCGCGCTCCATTTCCACTCAAATAGTGAGAAACCGAATGAAGAGTGTGAGGAATATCCAGAAGATCACCAAGGCCATGAAGATGGTTGCCGCATCCAAGCTGCGAGCCGTCCAGGCAAGAGCTGAAAATTCCCGTGGCCTCTGGCAACCATTCACCGCGCTTCTCGGTGACAATCCCAGTGTTGATGTCAAGAAGAGCGTTATTGTTACCATTTCTTCGGACAAAGGTCTTTGTGGTGGAATCAATTCCACGTCTGTCAAGATAAGCAGGGTTTTGCACAAATTGAATTCTGGGCCTGATAAAGAGACAAAATATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGGTGCGTGACTCAAAGAAACAGATTGTGCTCTGCCTTACTGAATTGCAGAAAAATCCCCTGAATTACACTCAGGTGTCTGTCTTGGCAGATGACATTCTAAAGAATGTGGAGTATGACGCATTAAGGATTGTTTTCAGCAAATTTCATTCTGTTGTATCATTTTTGCCAACAGTGTCAACTGTACTGTCTCCTGAGGTTATTGAGAGAGAGGCTGAATCAGGAGGAAAGCTAGGGGAACTGGATTCGTATGAGATTGAAGGTGGCGAGACAAAAGCTGAAATTCTTCAGAATTTGGCTGAGTTCCAGTTTTCTTGTGTCATGTACAATGCTGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGAATGTCTGCAATGGACAGCTCTAGCAGGAACGCTGGGGACATGCTTGATCGTCTCACCCTCACCTATAACAGAACTCGTCAAGCATCAATCACCACTGAATTGATAGAGATTATCTCTGGAGCTTCAGCACTGGAGGGTTAA 960 0.4677 MAMAAALRREGRRLTQPINALHSSLISHQDQAPHGARSISTQIVRNRMKSVRNIQKITKAMKMVAASKLRAVQARAENSRGLWQPFTALLGDNPSVDVKKSVIVTISSDKGLCGGINSTSVKISRVLHKLNSGPDKETKYVILGEKAKAQLVRDSKKQIVLCLTELQKNPLNYTQVSVLADDILKNVEYDALRIVFSKFHSVVSFLPTVSTVLSPEVIEREAESGGKLGELDSYEIEGGETKAEILQNLAEFQFSCVMYNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALEG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02231 319 PRINTS ATP synthase gamma subunit signature 190 207 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 PRINTS ATP synthase gamma subunit signature 98 117 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 PRINTS ATP synthase gamma subunit signature 264 283 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 PRINTS ATP synthase gamma subunit signature 295 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 Gene3D ATP synthase, gamma subunit, helix hairpin domain 44 314 - -
Pumo10g02231 319 CDD F1-ATPase_gamma 40 314 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 PANTHER ATP SYNTHASE GAMMA CHAIN 34 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 FunFam ATP synthase gamma chain 272 314 - -
Pumo10g02231 319 FunFam ATP synthase subunit gamma 64 276 - -
Pumo10g02231 319 Pfam ATP synthase 42 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 42 317 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 ProSitePatterns ATP synthase gamma subunit signature. 303 316 IPR023632 -
Pumo10g02231 319 Gene3D - 64 276 - -
Pumo10g02231 319 NCBIfam ATP synthase F1 subunit gamma 40 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pumo10g02231 319 PIRSF ATP_synthase_gamma 6 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02231 Pumo-Chr10 30980360 30987261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02231 17 317 Primary Pumps ATPases AT1G15700 29.545 4.28e-29 113