Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02215 ATGATAACAGACCTGTTAGACAGCAGTTTGGAGGCCATCTCCAAAAATTACAATGACCCTACTTTGGGTTATCTTTTCATCATTAACAATAGGAAGTTCATAGAGCTAAGAGCAAAACGGCGTGGATTGAGATATATTTTTGGCTATGATTGGCTTCAGAAAAACACAGCAAAATTCCAACAAAACCTTGAACTCTATCAAAGAAGCTCGTGGAGTAAGATTCTGAACATTTTAAAGCTGGACATCAATGAGTCAGAGCCTAATGTTGCGTTTGACATATTCTTAGTTCTTGTTGAGGCAATGGATATGTTGATGTTATTTATCAAATTGAGGTCTTAA 339 0.3628 MITDLLDSSLEAISKNYNDPTLGYLFIINNRKFIELRAKRRGLRYIFGYDWLQKNTAKFQQNLELYQRSSWSKILNILKLDINESEPNVAFDIFLVLVEAMDMLMLFIKLRS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02215 112 Gene3D Exocyst complex component Exo70 1 92 - -
Pumo10g02215 112 Pfam Exo70 exocyst complex subunit 2 85 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo10g02215 112 SUPERFAMILY Cullin repeat-like 3 82 IPR016159 -
Pumo10g02215 112 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 81 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02215 Pumo-Chr10 30403242 30405150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02215 2 81 EXO70 exocyst subunit family AT1G07000 40.000 4.09e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02215 - K07195 gmx:100795016 165.622