Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02198 ATGGCTATTGCTGAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAACGTATAGAAGAAAGATTATCTACTCTGGGAAATTGTATACTAGCTTGTAATGACCATGTGACCCTCACAAACACTGATCTTGACAGGCATATTGAGGAGATGATTGCAGATGTTCATGTTCACCCTCATACTTCCATTGAAGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTTGCTGGGACTGTCAATCGTGACACCACAGCAACAAAGCTCTCTATGATTGAGAGTGTTTTCAAGCTGAGAGAAGCCCAGCCTAGTGCCATTGTGGGTGAGATTAGGAAATTATCCCTCATTGATAGTTATGTCTAA 381 0.4094 MAIAEELQHLRNSLPDQVVVQRIEERLSTLGNCILACNDHVTLTNTDLDRHIEEMIADVHVHPHTSIEDLDELSTLLQVPLVAGTVNRDTTATKLSMIESVFKLREAQPSAIVGEIRKLSLIDSYV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02198 126 Gene3D - 60 105 - -
Pumo10g02198 126 SMART eIF6neu2 2 104 IPR002769 GO:0042256|GO:0043022
Pumo10g02198 126 Pfam eIF-6 family 3 59 IPR002769 GO:0042256|GO:0043022
Pumo10g02198 126 Gene3D - 1 59 - -
Pumo10g02198 126 SUPERFAMILY Pentein 3 104 - -
Pumo10g02198 126 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 3 59 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02198 Pumo-Chr10 29928834 29930110 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02198 5 126 Eukaryotic Initiation Factors Gene Family AT3G55620 57.988 4.05e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02198 K03264 - jre:108979950 176.792