Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02171 ATGACTGCTCAAGTGCATCTTCAATTACTGTTTCTAATGAGGAAAGTGGGAAAAGCACGTCTCCAAGAATCACTAGTGGTGCCAAACAGCAACGGTTTCATCCACCATGTTCCTTGCATTTCAACTCTTCCTTGGCCTTATCCTTGGAACTCTGCAGTTCCCTCAGCACCTGCTTTGTGCCCTCCAGGGTTTCCCATGCCATTCTACCCTGCTGCTGCATTTTGGAACATTCCATGGTTTCCCTCACAACACTCACACCACCATTCTGCTCCAAACTCTCCAACACTAGGGAAACACTCCCGCGACGACGACAACGCGGCAACAAAACAAGACCAATTACATGAAGAACCATTGTCCAGGCAGAGGAACGGGTCTGTTTTGGTCCCCAAAACACTGAGAATTGATGACCCAAGTGAGGCTGCCAAGAGTTCCATATGGGCAACTTTAGGGATCAAGAATGAGTGTGTCACTGGGGGTGGCATGTTCAAGGGATTCCAATCAAAGAAAGATGAGAAAGGCCATGTTGTTGAAGCCTCTCCAGTGTTGAGGGCTAACCCTGCAGCTTTGTCTAGATCCCTTAACTTTCATGAGAACTCTTGA 600 0.4783 MTAQVHLQLLFLMRKVGKARLQESLVVPNSNGFIHHVPCISTLPWPYPWNSAVPSAPALCPPGFPMPFYPAAAFWNIPWFPSQHSHHHSAPNSPTLGKHSRDDDNAATKQDQLHEEPLSRQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVTGGGMFKGFQSKKDEKGHVVEASPVLRANPAALSRSLNFHENS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02171 199 MobiDBLite consensus disorder prediction 86 131 - -
Pumo10g02171 199 MobiDBLite consensus disorder prediction 97 118 - -
Pumo10g02171 199 PANTHER CYCLIC DOF FACTOR 2 44 199 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02171 Pumo-Chr10 29415079 29415678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02171 39 197 C2C2-Dof Transcription Factor Family AT3G47500 57.229 9.10e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02171 - - gsj:114409713 318.546