Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02167 ATGCCAATTTCTCTGCACATTTCACAGTACTATGCTCTCATCTTAGACATGGAGAATCAGCAACTCCCATTTTGGAAGTCTAATTATGAAATTGATGACTACCCATTTGCACCTACGTGCCAATTTTCTTCATATGATTATTGCAGGGGTAATGCCAATGAAGGGTATCATTGGCCCTATGAGTTTCCTTTGCAAGATAGCTATCTTGATGCTATCCCTTTTATGAAGTGTTATTATCCTCATGACATTTTATATGAAACTCTTCCCATTGAACCAACCACACTAGGAGTGCAAGATTATGACTTTTGTGATGTTAAGAATGTGCTTTCTGCCTATAACGAAATTGATGGTTCGGATCATAAGCCTGTGTTTTCATCATCATGCAATGATGGAGAAAGTGTAAATGAAATGAAGGAAGATTTGAAGGGCAAGCAATGCAAAGAAGAGAGAATTAGTGGCAGTGCGAGAATGTTGTCAAGGAAAACCGTTTCTCAGTACTTTTACATGCCAATATCACAAGCCGCAAGAGAGCTTAATGTGGGCCTCACACACTTGAAGAAAAGGTGTAGGGAGTTAGGAATTCAGAGGTGGCCACATAGGAAGCTAATGAGTCTCCAAACCCTTATAAAGAATATGCAAGAGCAAGGAGAGGGCGAGGGGCATGAAAATGATGAAAAAAGAAGGACTGCCATTGAGATGTTGGAGAGAGAAAAGAAGATGGTGGAGGAAATGCCAGATTTGGAACTTGATGATAATACAAGAAGGCTTAGACAAGCTTGTTTTAAGGCTAACTACAAGAAGAGGAAACTCATGGGCATGAGGTTCATTGAACCCCAGTCTTCTCTTAGTGGCCTGTCCAAGAAGTATTGA 870 0.4034 MPISLHISQYYALILDMENQQLPFWKSNYEIDDYPFAPTCQFSSYDYCRGNANEGYHWPYEFPLQDSYLDAIPFMKCYYPHDILYETLPIEPTTLGVQDYDFCDVKNVLSAYNEIDGSDHKPVFSSSCNDGESVNEMKEDLKGKQCKEERISGSARMLSRKTVSQYFYMPISQAARELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNMQEQGEGEGHENDEKRRTAIEMLEREKKMVEEMPDLELDDNTRRLRQACFKANYKKRKLMGMRFIEPQSSLSGLSKKY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02167 289 Pfam RWP-RK domain 158 205 IPR003035 -
Pumo10g02167 289 ProSiteProfiles RWP-RK domain profile. 141 226 IPR003035 -
Pumo10g02167 289 PANTHER PROTEIN RKD4 150 272 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02167 Pumo-Chr10 29368683 29370071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02167 62 273 AtRKD Transcription Factor Family AT1G18790 44.393 1.13e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pumo10g02167 RWP-RK 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02167 - - gmx:100782238 488.804