Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02150 ATGCAACTTTTTGTTTCTAATTTTTATGGCACCACTTTTCTTGTTATTTATGGTATGGTTATTATGGGGATAGTATTGGAGTTAGAAGCCATGCCTACACCATCGAAGCTTCAATTGGAAGCAAATGCTATACTCAAGAGTGGATGGTGGAATCGATCGCAGTTAGATGCCCACAATATCTGTTCGTGGGATGGTATATCTTGCAACGACGCTGGAAGCATAACTAGAATCACATATTCGAATTCTACAGCAGGGATTCGTTTTGCAACACTAAACCTCTCTGCTTTCAAGAATTTGGAATGGCTAGAGGTCTCAGGAAGCGGACTAAGAGGGACAATCTCACCTGAAATTGGTAATCTCTCCAAACTAACTCATCTAGATTTGTCCGACAATTTTCTTGATGGTGAGATACCTCCTTCACTGGGAAATCTTACCCGATTAGAGAGCCTAATCATCTCTTACAACAACATTCAAGGTTACATTCCTCGTGAATTGTTGTTTCTGGAAAATCTTACTGTCTTAGATCTATCTCACAACAAAATCAATGGAGCCTTGCCCATTTCCCTAACAAATCTCACAAAAATACAAAAGCTTGACATTTCCCACAATCTACTCGTTGGTTCCCTAAAACCCTTGTCAAACCATGCATGGCTATGGAACATCAACCTCAGTCACAACTTCATTAGTGGTGAAATACCACCAGAGCTTGGATATTTGCCATCCATAGAAAGTTTGGAACTAAGCCACAATAATCTTACAGGAACAGTTCCTCTGACTCTGCAACATGTTTCGTATGTGGACTTTTCCTTCAATTATTTGAAGGGTACCATTCCAGATGGTTTCCCTCCATATGCGCTAATAGGCAACAAGGGTGTTTGTAGCGACATTTTGGATATCCGAACCAAATTCCAATTCCAGCCTTGTCCTCATAGTTCTTCTGACTATCTGATCATAGTTTTATATATCCTCATTTGTGTAAGCATTCTTTCCTTCCTATTTGTGTGTACGTTGCTTATTGCAAATAACAAACATGCAAAAACAACGGTGACTAAGAATGGGGACTTGTTCTGTGTAATGAACTTTGATGGAAACATAGCCTATGAAGACATAATTAGAGCAACAGAAGACTTTGACATGAAATATTGTATTGGAACAGGAGCATATGGGAGTGTTTACAAGGCACAATTACCATGTGGCAAGATTGTTGCCTTGAAAAAACTTCATGGCTTTGAAGCAGAGGTGCCGGCTTTTGATGAGAGTTTTAGAAATGAGGTCAAAGTATTATCAGAAATAAGGCATCGACATATCGTCAAGCTTTATGGATTCTGTTTGCACAAAAGAATCATGTTTTTGATCTATCAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCCTGTTTGATGATGTGGAAGCAATGGAATTAGATTGGAGAAAGAGGGTTAACATAGTGAAAGGCACTGCACATGCTCTGTCATATCTTCATCATGATTGCACCCCTCCAATAGTGCATAGAGACATATCAGCCAGCAATGTCTTGCTTAACTCAGAATGGGAGCCCACTGTTTCTGACTTTGGCACAGCCCGATTCCTCAACCTTGATTCATCCAATCGAACTATAGTTGCAGGAACCATTGGATATATAGCTCCAGAGCTTGCGTATAGTATGGTTGTGAGTGACAAGTGCGATGTGTATAGCTTTGGAGTGGTGGCACTTGAAACTTTGATGGGAAGGCATCCTAAGGAAATACTGTCATCACTTCAATCAGCTTCTACTGAACATTTGATCACATTATGTGAAGTATTGGACCAACGCCTCCCACACCCAACAATGTCAGTTTTATTGGACATAGTTCGTCTTGCCACAGTGGCATTTGCGTGCTTAAATCCCAATCCTTCCTCTCGCCCAACAATGAAATGTGTTTCTCAATGTTTTCTTATTGAACTCACACCGTTAAACATTCCCTTGCGTGAAATTTCATTGCAGCAACTCATGAGTCAAGAACTCAGGCACTATATAAAATTGTGA 2025 0.401 MQLFVSNFYGTTFLVIYGMVIMGIVLELEAMPTPSKLQLEANAILKSGWWNRSQLDAHNICSWDGISCNDAGSITRITYSNSTAGIRFATLNLSAFKNLEWLEVSGSGLRGTISPEIGNLSKLTHLDLSDNFLDGEIPPSLGNLTRLESLIISYNNIQGYIPRELLFLENLTVLDLSHNKINGALPISLTNLTKIQKLDISHNLLVGSLKPLSNHAWLWNINLSHNFISGEIPPELGYLPSIESLELSHNNLTGTVPLTLQHVSYVDFSFNYLKGTIPDGFPPYALIGNKGVCSDILDIRTKFQFQPCPHSSSDYLIIVLYILICVSILSFLFVCTLLIANNKHAKTTVTKNGDLFCVMNFDGNIAYEDIIRATEDFDMKYCIGTGAYGSVYKAQLPCGKIVALKKLHGFEAEVPAFDESFRNEVKVLSEIRHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLFDDVEAMELDWRKRVNIVKGTAHALSYLHHDCTPPIVHRDISASNVLLNSEWEPTVSDFGTARFLNLDSSNRTIVAGTIGYIAPELAYSMVVSDKCDVYSFGVVALETLMGRHPKEILSSLQSASTEHLITLCEVLDQRLPHPTMSVLLDIVRLATVAFACLNPNPSSRPTMKCVSQCFLIELTPLNIPLREISLQQLMSQELRHYIKL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02150 674 Gene3D Transferase(Phosphotransferase) domain 1 456 648 - -
Pumo10g02150 674 PRINTS Leucine-rich repeat signature 171 184 - -
Pumo10g02150 674 PRINTS Leucine-rich repeat signature 239 252 - -
Pumo10g02150 674 Gene3D Phosphorylase Kinase; domain 1 339 455 - -
Pumo10g02150 674 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Pumo10g02150 674 FunFam Nuclear pore complex protein NUP107 26 171 - -
Pumo10g02150 674 Pfam Leucine Rich Repeat 122 144 IPR001611 GO:0005515
Pumo10g02150 674 FunFam Leucine-rich repeat receptor protein kinase MSP1 340 455 - -
Pumo10g02150 674 SMART LRR_sd22_2 120 146 - -
Pumo10g02150 674 SMART LRR_sd22_2 192 214 - -
Pumo10g02150 674 SMART LRR_sd22_2 168 183 - -
Pumo10g02150 674 SMART LRR_sd22_2 239 268 - -
Pumo10g02150 674 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Pumo10g02150 674 SMART LRR_typ_2 239 262 IPR003591 -
Pumo10g02150 674 SMART LRR_typ_2 168 192 IPR003591 -
Pumo10g02150 674 SMART LRR_typ_2 120 144 IPR003591 -
Pumo10g02150 674 ProSiteProfiles Leucine-rich repeat profile. 170 193 IPR001611 GO:0005515
Pumo10g02150 674 FunFam MDIS1-interacting receptor like kinase 2 456 650 - -
Pumo10g02150 674 SUPERFAMILY L domain-like 54 281 - -
Pumo10g02150 674 PANTHER LEUCINE RICH REPEAT KINASE 2 92 645 - -
Pumo10g02150 674 Pfam Protein kinase domain 382 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02150 674 Gene3D Ribonuclease Inhibitor 35 184 IPR032675 -
Pumo10g02150 674 Gene3D Ribonuclease Inhibitor 185 301 IPR032675 -
Pumo10g02150 674 ProSiteProfiles Protein kinase domain profile. 377 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02150 674 SUPERFAMILY Protein kinase-like (PK-like) 362 643 IPR011009 -
Pumo10g02150 674 ProSitePatterns Tyrosine protein kinases specific active-site signature. 501 513 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02150 Pumo-Chr10 29092317 29095169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02150 104 549 Receptor kinase-like Gene Family AT4G08850 41.578 3.24e-114 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo10g02150 Pkinase 5.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02150 - - ccaj:109796569 843.958