Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02145 ATGGATTCTCTGAAGATGTTCAAAGGTTATGGAAAAGTAGAACACGACCAACAACACCACCTCGAAGATCAACAACAACAACAACAACATCGTAATAACCCCAAACCCAAATTCTCAAAACCCTTCATCGCCGCAATTTCCATCTTCGCAATCCTCTTCCTCACTCTCACCTTCGCCTTCGCCCTAGCATCGATCCTCCACCACACCGAGTCACAACAACAACAACAGCTTCTTCTCAACTCGGCCGAGTCGATCCGAGTCGTCTGCAACGTCACGCGCTTCCCCGACGCGTGCCTCGCCGCCATCCCGCCCTCCCCCAACGCCACAAACCCCCAAGCGATCCTCGCCCTCTCGCTCCGCGCGTCGCTCCACGCGCTCCAGAGCCTCGCGTCCTCGCTCGGAGCGGAGAACTCACGCGCGCTCGCCGACTGCAGGGAGCAGCTGGACGACGCGCTGAGCCGACTCAACGACTCGCTGTCGGCCGCGGCGGCGCTCACGGAGGCGACGGTGTCCGACGTGCAGACGTGGGTGAGCGCGGCGGTGACGGACCAGGAAACGTGCCTGGACGGGCTGGAAGAGGTGGGTGACGTGGCGGCCGTGGAAGAGATTAAAAAAATGATGAAGAGGTCCAGTGAGTACACCAGTAACAGTTTGGCTATTGTCGCTAATATTCGCAACTTGCTACGCCAGTTCCACATATCACTCCATTGA 711 0.5795 MDSLKMFKGYGKVEHDQQHHLEDQQQQQQHRNNPKPKFSKPFIAAISIFAILFLTLTFAFALASILHHTESQQQQQLLLNSAESIRVVCNVTRFPDACLAAIPPSPNATNPQAILALSLRASLHALQSLASSLGAENSRALADCREQLDDALSRLNDSLSAAAALTEATVSDVQTWVSAAVTDQETCLDGLEEVGDVAAVEEIKKMMKRSSEYTSNSLAIVANIRNLLRQFHISLH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02145 236 SMART PMEI_2 80 220 IPR006501 GO:0004857
Pumo10g02145 236 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 84 224 IPR035513 -
Pumo10g02145 236 MobiDBLite consensus disorder prediction 15 36 - -
Pumo10g02145 236 PANTHER PECTINESTERASE INHIBITOR-LIKE 51 220 - -
Pumo10g02145 236 CDD PMEI-like_3 88 224 - -
Pumo10g02145 236 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 226 IPR035513 -
Pumo10g02145 236 FunFam Pectinesterase 81 225 - -
Pumo10g02145 236 Pfam Plant invertase/pectin methylesterase inhibitor 84 220 IPR006501 GO:0004857
Pumo10g02145 236 NCBIfam pectinesterase inhibitor domain 56 223 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02145 Pumo-Chr10 29059127 29060243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02145 1 236 Carbohydrate Esterase AT1G53840 32.950 2.92e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02145 - - gmx:100789567 300.827