Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02144 ATGTCTGGCCAGAGAAACTCCAGAACTTCAAAATTTACAGAAAGTGAGATTAATGATCTGCTGTTGAGGCTACAAGCACTGCTACCACAACTAAACCAAACAAGCAACTCAAGGGTATCAGTAAGCGTGATGAAGATCATAAAGGAAACTTGCTCTCACATCAATAAGCTACAGAAAGAGGTGAAAGATCTTGGTGAAAGGCTAGCAGAGCTGATGGATTCTATAGACCTTAGTGATATTGACGAGGAACGTCTTACAAGACTTTTGCAACAATAA 276 0.3986 MSGQRNSRTSKFTESEINDLLLRLQALLPQLNQTSNSRVSVSVMKIIKETCSHINKLQKEVKDLGERLAELMDSIDLSDIDEERLTRLLQQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02144 91 Coils Coil 47 74 - -
Pumo10g02144 91 PANTHER DNA BINDING PROTEIN 1 91 IPR044172 -
Pumo10g02144 91 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 75 IPR036638 GO:0046983
Pumo10g02144 91 Gene3D - 8 88 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02144 Pumo-Chr10 29057009 29057773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02144 2 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 46.753 3.00e-15 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02144 - - gmx:100790746 150.984