Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02135 ATGACGACCACTGTCACCGGTATCCGGTTAGTGGCGCAGCAATTCAGAGCGCTGCTGAAGAAGAACCTGCTGCTATCATGGCGGAACAAGAGGGCGAGCCTCTTACAGCTACTCTCCCCTCTCATGTTCATTTTCCTCATATTCGCAATCGACAAGGCGATTAAGGCGCAAACCTCAACCTCCTCTTCTTACAAGAGCGTCAGAGACCCACCCATGGAACCTTCTCCCTCCATCACGCCCTGCGAAGACAAGTTCTTCGTCAAACTCCCCTGCTACGACTTCGTCTGGAGCGGTGACTCGAACCCCAAGTTCCAGACCATCGTCGCGCGAATCATGAACAACAACCCCGGCAGACCCATCCCTCCCTCCAAGGTGAAGTCGTTCAAGGACAAGGGTGAAGTGGATGCGTGGCTTTTCAGTAACCCTATGCGGTGTCCCGGGGCGCTTCATTTTATGGAGCAAAACGACACCGTTATAAGCTACGGTCTTCAGACCAACTCCACCGGTCTTCAGCGGCGAGGCAAGTACGAGGACTCCACGGCATCGTTTCAGCTCCCTCTTCAGCTCGCCGCCGAGCGTGAAATTGCCAGGCACCTTATTGGAGACGCGGGATTCAGTTGGAATGTGTTTCTGAGGGAATTCGCGCACCCTTCCATGAGTCCTTTCTCTGCTGTGGGTTCAATTGGTCCTGCGTTTTTCCTCGCCATCGCCATGTTTAATTTTGTTCTTCAGATCAGCTCTTTGGTCACGGAGAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGGCTTTATGACTTTGCTTACTGGTTGTCCTGGCTCATCTGGGAGGGAGTTGTCACAATCATATCGTCCCTCCTCATAGTTCTCTTTGGAATGATGTTCCAGTTTCGCTTTTTCTTGGATAACAGTTTTGCGGTCCTGTTCTTTTTGTTCTTCCTATTTGAACTTAATATGACTGGCTTGGCCTTCATGTTATCTGCTTTCATTCGGAAATCATCTTCGGCAACAACAGTGGGGTTCTCTATATTTATTGTGGGCTTTTTGACTCAGCTTGTGGTACAAGCAGGATTTCCTTACGATGATAGCTTCTCCAGAACTATACGAAATGTGTGGTCGTTATTCCCACCCAATCCTTTTGCTCAAGGTATACAAGTGCTTTCAGATGCAGTTGCAACTTCTGAAGACCATGGTGTTAGCTGGAGCAAACGGGGAGAATGTGCTCTTACTGAAACAGACTGTGTGATAACTATTGATGACATTTATAAATGGCTTGCGGCTACATTCTTACTCTGGTTTGTTCTGGCCATTTACTTTGACAATATAATCCCAAATGCATCGGGTGTGAGGAAATCAATATTGTACTTTCTAAATCCCAATTATTGGATGGGAAAAGGAGGTCAAAAAGTGAAAGAGGGTGGGGTTTGTAGCTGTATAGGTTCAGCCCCACGTCAAGAACAGAGTACACCAGATGATGAGGATGTCCTTGAAGAAGAAAACAAAGTGAGACAGCAACTAACAGAAGGTCTGGTTGACACAAATGTTGCTGTTCAGATACATGGCCTTGCAAAGACATATCCTGGTACACGTAACATTGGTTGCTGCAAATGCAAAAGAACTAATCCTTACAATGCTGTTAAGGGTTTTTGGGTGAACTTTGCAAAGGATCAGTTATTTTGTCTTCTAGGACCCAATGGAGCTGGAAAAACTACAGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCGTTGATTTATGGACATTCAATCAGAAGTTCTACTGGCATGTCAAACATTCGAAAGCTTATAGGAGTATGTCCACAGTTTGATATCCTATGGGATGCACTGTCTGGTCAAGAACACCTCCAACTCTTTGCTACTATTAAAGGCCTGTCCCCAGCTTCCATAAAATCAATTACCCAGACTTCATTAGCAGAGGTGAGACTCACGGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTCAGTGTTGCAATTGCCCTTATTGGTGATCCTAAGTTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGAAGGCATGTGTGGGACATAATTGAAAATGCAAAAAGAGGGCGTGCCATTGTTCTTACAACGCACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCAAAAGGAAGGCTTCGCTGCATTGGCACCTCAATCAGATTGAAGTCACGCTTTGGTACTGGTTTTATTGCTAATATCAGCTTCCATGGAAACAATAATGAACGTAGTCCTGCCAATGGAGATGCAATATCTACAGAACATCGTGAGGCACTGAAGAAATTCTTTAAGAATCGTTTAGATGTAGTGCCAAAAGAAGAGAACAATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCACTCCTGACAAATTTCTTTTCGGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTGGAAGAAGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAACGCTGCAGCTGAAGGGAGACTAGTGACCCTGACCTTAACATCTGGGGAATCTGTGCAGATTCCTATAGGAGCTAGGTATGTGGGAATTCCAGGAACCGAGTCTGCTGAAAACCCCACTGGTTTTATGGTAGAAGTATACTGGGATCAAGATGATACTGGTGCCCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTATTCCTTTTGGCGTTCAACTATCATCCTCTTCTTCTGGAAGACACCGTAGATACTTAGGCCGTTCAGGACCAGTTCATGGGTTTGTCATTGATCCAAGTCAAGTTAGTTCAGTAGCTTTTCAGTGA 2901 0.4533 MTTTVTGIRLVAQQFRALLKKNLLLSWRNKRASLLQLLSPLMFIFLIFAIDKAIKAQTSTSSSYKSVRDPPMEPSPSITPCEDKFFVKLPCYDFVWSGDSNPKFQTIVARIMNNNPGRPIPPSKVKSFKDKGEVDAWLFSNPMRCPGALHFMEQNDTVISYGLQTNSTGLQRRGKYEDSTASFQLPLQLAAEREIARHLIGDAGFSWNVFLREFAHPSMSPFSAVGSIGPAFFLAIAMFNFVLQISSLVTEKELKLRQAMTMMGLYDFAYWLSWLIWEGVVTIISSLLIVLFGMMFQFRFFLDNSFAVLFFLFFLFELNMTGLAFMLSAFIRKSSSATTVGFSIFIVGFLTQLVVQAGFPYDDSFSRTIRNVWSLFPPNPFAQGIQVLSDAVATSEDHGVSWSKRGECALTETDCVITIDDIYKWLAATFLLWFVLAIYFDNIIPNASGVRKSILYFLNPNYWMGKGGQKVKEGGVCSCIGSAPRQEQSTPDDEDVLEEENKVRQQLTEGLVDTNVAVQIHGLAKTYPGTRNIGCCKCKRTNPYNAVKGFWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTDGDALIYGHSIRSSTGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLSPASIKSITQTSLAEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFHGNNNERSPANGDAISTEHREALKKFFKNRLDVVPKEENNNFLTFVIPHDREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIARQAELENAAAEGRLVTLTLTSGESVQIPIGARYVGIPGTESAENPTGFMVEVYWDQDDTGALCIAGHSQKVPIPFGVQLSSSSSGRHRRYLGRSGPVHGFVIDPSQVSSVAFQ 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02135 966 Gene3D - 508 781 IPR027417 -
Pumo10g02135 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 745 IPR027417 -
Pumo10g02135 966 CDD ABC_subfamily_A 518 751 - -
Pumo10g02135 966 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 763 IPR003439 GO:0005524
Pumo10g02135 966 Pfam ABC-2 family transporter protein 33 439 IPR013525 GO:0016020|GO:0140359
Pumo10g02135 966 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 493 859 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pumo10g02135 966 Pfam ABC transporter 552 692 IPR003439 GO:0005524
Pumo10g02135 966 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524|GO:0016887
Pumo10g02135 966 SMART AAA_5 556 740 IPR003593 GO:0016887
Pumo10g02135 966 FunFam ABC transporter A family member 2 508 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02135 Pumo-Chr10 28791694 28798380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02135 547 762 Calmodulin-binding Proteins AT2G36910 22.566 2.60e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02135 - - gmx:100786538 1773.06