Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02134 ATGGGGAAATCACCAGGAAAATGGATCAAAACCGTACTATTTGGGAAAAAGTCATCCAAATCAAATATTTCAAGAGGAAGAGAGAAGCTTGTTAATAAAAAAGAAGCAGTGGTTGCTTCCAACGTGTTGGAAAATGGTTTGGCCTTACATCCAACCCCCAACGAGATTGCTACAAATGAGGAGGACATTGAACTGGAGAATGAAGAATCAGAAAATATTTTACCTGAAAATCAAGAAAGAGACATTATGGGATCTGTTGATCCGGATGCACCACTTGATCCAGAGAAAATCAGGCAGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTACTTGGCTCGCAGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTATTGTTACATTATACTGTATGTATGGGATTGTAAAGTTACAAGCACTTGTCCGTGGAGGAAGGATTAGACAGTCCAATGTTGGATTTGAAATCCATGAGAAGTACAATCTATTTAAGCCTCAGGATGGAAAACTTGGTGAACTAGTTGGTATTTCCACAAAAATTTCAAAGCTTTCTGCAAATACTTTCATCCGTAAGCTTCTTGCTTCATCAATTACGATAATGGCCCTGCGCCTGCAATATGTTAGTGGAGATCCGAATTCAGTCTTAAGCTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGAGACTCTAAATCTCACAGAAAGCAGGGTAATATTTCAAATGGAGAAGCTCAAATTACCAAGTCAAAACGCACTACCAGGAAGCTTCCTATTGCAAATTTTGAACCAGCCCCGGTGCAAACAAATCCTGAATTTGAGAAACCAAAACGTAATTTCAAGAAAATACCATACCAAGTGTCAGATCCAGAGCAAGAAAATCCACAAAGTGAGCTTGAAAAGGTCAAACGTAGCTTGAGAAAGATTCATAACCCTGTTGTTGAGAATGCTGTTCAGCCAGAAGTTGAATGTGAGACCCCCCCAAAGCAGCATTTGGAAATGGCAACAGTTATTCCAGGTCACTCTGTTTCAGAACAAGTGGTCATTACTTCTGATGAAAAGATCAAGAAGGAAGCAATTTTGAACATCTCCAATGTACCTGAAGTAGAAATTACTCCAACACCATCAGTTAACAAGGAGGTGTCTGACATTCCAAACAGTTATCAAGTGTCTGTAGAATCAAAGCCCTTGGAAGAGACTACAACTAAAGATAGAAATACTTCTCATGACGAAGTTAAAAATGAGCTGGGCAATCTACCAGAGATTATTTTCAAAGATGAAAATTCCCTGTTAACAAATGGAGATTTGAATCATAAAGAAGAGATAACAGTTAATGAAAATCGAAAGCCTACTCGGAAAGCCTCAAATATGGCAAAGCAGGAGAATGGAGAAGATGGCTTAAAGAATAGTCCAAAATTACCAAGTTATATGGCTGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGGTTTGAACAAGATGAAATTGAGAAAAACAACTCTGCTGGTTCTGGGAGACATTCTCTGCCATCTTCAACTAACAAGAAGATTAGTTCGCATTCACCTAGGACACAGAGATCGGTTCAAGCAGGTGGCAAAGGGGGCAACAAAAGTGACAGAATAATACCATCTTCTAAAGGAGGGAATGGGAAGATAATTCAAGCAGAGTGGAGGAGGTGA 1764 0.4059 MGKSPGKWIKTVLFGKKSSKSNISRGREKLVNKKEAVVASNVLENGLALHPTPNEIATNEEDIELENEESENILPENQERDIMGSVDPDAPLDPEKIRQEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAIVTLYCMYGIVKLQALVRGGRIRQSNVGFEIHEKYNLFKPQDGKLGELVGISTKISKLSANTFIRKLLASSITIMALRLQYVSGDPNSVLSWLERWSASYFWKPVPQPKKIRDSKSHRKQGNISNGEAQITKSKRTTRKLPIANFEPAPVQTNPEFEKPKRNFKKIPYQVSDPEQENPQSELEKVKRSLRKIHNPVVENAVQPEVECETPPKQHLEMATVIPGHSVSEQVVITSDEKIKKEAILNISNVPEVEITPTPSVNKEVSDIPNSYQVSVESKPLEETTTKDRNTSHDEVKNELGNLPEIIFKDENSLLTNGDLNHKEEITVNENRKPTRKASNMAKQENGEDGLKNSPKLPSYMAATESAKAKLRAQGSPRFEQDEIEKNNSAGSGRHSLPSSTNKKISSHSPRTQRSVQAGGKGGNKSDRIIPSSKGGNGKIIQAEWRR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02134 587 Pfam Protein of unknown function (DUF4005) 484 566 IPR025064 -
Pumo10g02134 587 MobiDBLite consensus disorder prediction 530 560 - -
Pumo10g02134 587 SMART iq_5 98 120 IPR000048 GO:0005515
Pumo10g02134 587 SMART iq_5 121 142 IPR000048 GO:0005515
Pumo10g02134 587 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Pumo10g02134 587 MobiDBLite consensus disorder prediction 515 529 - -
Pumo10g02134 587 MobiDBLite consensus disorder prediction 249 280 - -
Pumo10g02134 587 MobiDBLite consensus disorder prediction 460 587 - -
Pumo10g02134 587 MobiDBLite consensus disorder prediction 262 279 - -
Pumo10g02134 587 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Pumo10g02134 587 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Pumo10g02134 587 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Pumo10g02134 587 Gene3D - 97 145 - -
Pumo10g02134 587 MobiDBLite consensus disorder prediction 463 483 - -
Pumo10g02134 587 PANTHER IQ-DOMAIN 5-RELATED 1 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02134 Pumo-Chr10 28782227 28789236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02134 1 587 IQD Protein Family AT1G74690 44.108 1.54e-123 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02134 - - gmx:100786022 994.186