Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02131 ATGGAGTTTGGTTCGGAAAGATCTGGTCATCAAGTCAAGGATGAGAAGAGAAGTGAATCTAGTGTTGGCGATGAAGAAGATCGTCATGAACAAGAGATTGTTATGCAGGAGCCACCCCTGTCTACTACCGAAAGATCCACAGTGGAGGCTGGGCCAAATGCTTCTTCCCTTACCAAAAAGCAAGAGGCTGATGAACTTGAAAATGCCAAAGCCGAAATGGGTGAAGTGATGGAAGAAAATCAACGTCTAAAGACGTGTTTGAACCGAATACTAAATGATTACCGCACACTGCAAATGCAATTCCACAACATAGTTGAACAAGAGACAAAAGATTCTTCTGATGAGAAAGTGAACAACAACAATGACCATAAAGAAATGATAGAGGAATCAGAACTAGTTTCCCTCAGTCTTGGAAGACTTCCAAAAAACAATGAGAAAGCCAATAATAAAGCATTGAAAGAGGAAGCTGAAGATAAAGAAGGGTTGTCCCTTGGACTGGAGTGCAAATTTGAAACATCAAAATCTGGAAGCACAACTGAACATTTGGCAAATAATCAAAGCCCTACTAATAGTGTTGAAGAAGTGCCAAAGGAAGAAGCAGCTGGGGAGAGTTGGCAACCTAGCAAGGGACACAAGACAACTAGAGATACTACTGGAGAGAATGAAGTTTCTCAACAAAATCCTGCAAAGAAAGCAAGGGTTTGTGTGAGAGCAAGATGTGACACCCCAACTATGAACGATGGATGTCAGTGGAGGAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGCCCCGTAAGAAAGCAGGTGCAAAGATGTGTTCAAGACATGTCCATATTAATCACCACCTACGAAGGGAACCACAACCACCCTCTTCCTCTTTCAGCCACAGCCATGGCTTCCACCACTTCTGCAGCCGCTTCCATGCTATTATCCGGCTCATCAACCTCATCACACTCTGGATCAAGACCTTCCACAGCCATGACCACCACTGCTGCAGATCTTCACGGAATGAACTTTTTCCTATCAGACGGTTCCAAATCAAAGCAATACTACCTGTCCCCCCCTGCACTCTCATCTTCACACCCTACCATCACTCTCGACCTCACTAATTCCAATCCATCATCCTCATCTTCTTCTGCCCCTTTTGTTAAATTCACTTCGAACTCAAACTACAACACACAAAGGTACCCTCTTTCCACAAGCCTAAACTTCAGTTCCTCAGAATCCAATAATGCAACATCTTGGAGCAATAATGGGTTCCTCAGCTACAACACAACTCAACCATATAACAACAATAGGAATGTGACAAATGTCCTTGGAAACATAAACCTTGGAAGACAACAACAACAACCAATGGAAAATATCTACAATTCCTACATGCAAAGGAACAACAACAACAACAATCCAATCCCTCCACCACCACAACATTCTCTGCCAGACACCATAGCTGCAGCAACAAAAGTGATCACAGCAGACCCCAATTTTCAGTCAGCTTTGGCAGCAGCACTTACAACAATCATTGGCTCTGGAAGCAGCAGCACTCAAGGAAACCAACAAGGTGGTGCTGGGGAAAATCTGATGAGTCAGAAAATGAAATGGGGTGAATTGTTTCCATCATCTTCTGCCTTACCCTTACCTAATTCATCTTCAAAAGTCAACATTGGATGTGCATCAAGCTTCTTGAACAAATCACCCTCCAATACACAACCAGGAACTTTGATGTTTCTTCAGCCACCTTTGCCTCTTTCTAGCCCCAAAAGCGCTTCTGGGTCTCCAGGAGATCACAGAGACAAGAGAAATTGA 1845 0.4347 MEFGSERSGHQVKDEKRSESSVGDEEDRHEQEIVMQEPPLSTTERSTVEAGPNASSLTKKQEADELENAKAEMGEVMEENQRLKTCLNRILNDYRTLQMQFHNIVEQETKDSSDEKVNNNNDHKEMIEESELVSLSLGRLPKNNEKANNKALKEEAEDKEGLSLGLECKFETSKSGSTTEHLANNQSPTNSVEEVPKEEAAGESWQPSKGHKTTRDTTGENEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCVQDMSILITTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSTSSHSGSRPSTAMTTTAADLHGMNFFLSDGSKSKQYYLSPPALSSSHPTITLDLTNSNPSSSSSSAPFVKFTSNSNYNTQRYPLSTSLNFSSSESNNATSWSNNGFLSYNTTQPYNNNRNVTNVLGNINLGRQQQQPMENIYNSYMQRNNNNNNPIPPPPQHSLPDTIAAATKVITADPNFQSALAAALTTIIGSGSSSTQGNQQGGAGENLMSQKMKWGELFPSSSALPLPNSSSKVNIGCASSFLNKSPSNTQPGTLMFLQPPLPLSSPKSASGSPGDHRDKRN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02131 614 MobiDBLite consensus disorder prediction 36 59 - -
Pumo10g02131 614 Pfam WRKY DNA -binding domain 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g02131 614 MobiDBLite consensus disorder prediction 1 74 - -
Pumo10g02131 614 MobiDBLite consensus disorder prediction 105 158 - -
Pumo10g02131 614 MobiDBLite consensus disorder prediction 572 588 - -
Pumo10g02131 614 Gene3D WRKY domain 229 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g02131 614 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g02131 614 MobiDBLite consensus disorder prediction 1 34 - -
Pumo10g02131 614 Coils Coil 59 86 - -
Pumo10g02131 614 MobiDBLite consensus disorder prediction 572 614 - -
Pumo10g02131 614 MobiDBLite consensus disorder prediction 173 232 - -
Pumo10g02131 614 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g02131 614 FunFam probable WRKY transcription factor 31 230 307 - -
Pumo10g02131 614 MobiDBLite consensus disorder prediction 173 193 - -
Pumo10g02131 614 Coils Coil 142 162 - -
Pumo10g02131 614 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 533 IPR044810 GO:0003700
Pumo10g02131 614 MobiDBLite consensus disorder prediction 107 130 - -
Pumo10g02131 614 MobiDBLite consensus disorder prediction 60 74 - -
Pumo10g02131 614 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02131 Pumo-Chr10 28751388 28756605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02131 73 523 WRKY Transcription Factor Family AT5G15130 42.041 4.76e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g02131 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02131 - - gmx:100804403 884.789