Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02121 ATGGAAATGGGTCATGTAGTGTTGATGTTGTTGGTGGTGATTTCCACCACTGTTTTATGCCCTTCTTCTCTTGCTCTAACGCAAGATGGATTGGCATTGTTGGAGATCAAAAGCACTTTGAATGACACAAGGAATTTTCTGAGAAACTGGAGAGAGTCTGATAAGTCTCACTGTTCATGGACTGGTATCACTTGTCATCCTGGGGAACAACGAGTTCGCTCAATAAATTTACCTTACATGCAACTGGGGGGGATTATATCTCCCAGCATTGGCAAACTCAGTAGACTGCATAGACTGGCACTTCATCAAAATGGCTTACATGGAGTTATTCCCAATGAAATTAGCAATTGTACTGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTACAAGGAGGCATCCCATCAAATATTGGAAATCTTTCTTTTTTACATGTATTGGATTTATCAAGCAACTCATTGAAGGGTGCTATACCTTCTTCTATTGGCCGTCTTACACAATTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCCGACATTGGAGTACTAAGCACCTTTGGGAACAATGCGTTTATTGGGAATTTAGATCTTTGTGGACGGCAAGTTCAGAAACCATGTCGGACATCACTTGGTTTCCCAGTGGTGCTACCACATGCTGAAAGTGATGAAGCTGCAGTCCCTGCCAAAAGATCTTCAAATTACGTGAAGTGGGTGCTAGTTGGTGCAATAACAATAATGGGCCTTGCACTTGTTATAACTCTTTCATTACTATGGATTTGTTTGCTATCAAAGAAAGAAAGAGCTGCTAGGAGATACATAGAAGTTAAGGATCAAGTCAATCCAGAATCAAGTAGGAAGGATGATGGTACAAAACTCATCACCTTCCATGGTGATCTGCCATACACATCATTTGAGATCATAGAAAAGTTGGAGTCTCTTGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACTGTTTACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAAGTCGTGAAGGTTCTGATCAGGGTTTTGAAAGGGAACTAGAAATATTGGGTAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGCAGACTTCCTTCTACTAAGCTTCTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACCGAACAATCACTGAATTGGAGTACTCACCTAAAGATAGCCCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCACCATGACTGCTGCCCAAAAATTGTGCATCGCGACATAAAATCCAGCAACATCCTTCTTGATGAGAACATGGAGCCTCGTGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTAGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACATTTGGTTATCTAGCACCAGAGTATCTACAAAGTGGGAGAGCTACTGAGAAGTCAGATGTGTATAGTTTTGGTGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTTCCTTTGCAAGGAGAGGTGTAAATGTTCGTTGGTTGGATGAACACATTCCTAAGAGAAAATAG 1623 0.4134 MEMGHVVLMLLVVISTTVLCPSSLALTQDGLALLEIKSTLNDTRNFLRNWRESDKSHCSWTGITCHPGEQRVRSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEISNCTELRALYLRANYLQGGIPSNIGNLSFLHVLDLSSNSLKGAIPSSIGRLTQLRVLNLSTNFFSGEIPDIGVLSTFGNNAFIGNLDLCGRQVQKPCRTSLGFPVVLPHAESDEAAVPAKRSSNYVKWVLVGAITIMGLALVITLSLLWICLLSKKERAARRYIEVKDQVNPESSRKDDGTKLITFHGDLPYTSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQSLNWSTHLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMEPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFARRGVNVRWLDEHIPKRK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02121 540 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 188 - -
Pumo10g02121 540 Gene3D Transferase(Phosphotransferase) domain 1 394 540 - -
Pumo10g02121 540 ProSiteProfiles Protein kinase domain profile. 318 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02121 540 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Pumo10g02121 540 Pfam Protein kinase domain 321 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02121 540 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 394 540 - -
Pumo10g02121 540 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Pumo10g02121 540 SUPERFAMILY Protein kinase-like (PK-like) 296 521 IPR011009 -
Pumo10g02121 540 SMART serkin_6 318 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02121 540 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 536 - -
Pumo10g02121 540 Gene3D Ribonuclease Inhibitor 26 213 IPR032675 -
Pumo10g02121 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Pumo10g02121 540 SUPERFAMILY L domain-like 26 210 - -
Pumo10g02121 540 Gene3D Phosphorylase Kinase; domain 1 281 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02121 Pumo-Chr10 28642684 28647920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02121 10 540 Receptor kinase-like Gene Family AT2G35620 49.060 6.71e-168 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pumo10g02121 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02121 - - gmx:100805042 1016.91